Factsheet for Bra028537.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67541	Canola	cytosol	99.34	99.34
CDY13342	Canola	cytosol	98.25	98.25
Bra019642.1-P	Field mustard	cytosol	87.28	87.28
AT3G52870.1	Thale cress	cytosol	87.06	87.06
Solyc10g083360.1.1	Tomato	cytosol	60.53	59.23
PGSC0003DMT400072375	Potato	cytosol	60.53	59.23
KRG96176	Soybean	plastid	60.53	59.1
EES09264	Sorghum	cytosol	57.89	58.02
Solyc10g085610.1.1	Tomato	cytosol	54.82	57.47
KRH32680	Soybean	cytosol	60.09	56.73
VIT_08s0007g03630.t01	Wine grape	cytosol	58.11	56.62
EES16640	Sorghum	cytosol	55.92	56.42
Zm00001d052525_P001	Maize	cytosol	57.89	56.41
KRH30882	Soybean	cytosol	58.55	56.33
TraesCS5A01G129600.1	Wheat	cytosol	56.8	56.18
Zm00001d004916_P001	Maize	cytosol	44.74	55.59
HORVU6Hr1G019510.4	Barley	cytosol	58.11	55.44
GSMUA_Achr3P03060_001	Banana	cytosol	46.27	55.24
Os12t0149900-01	Rice	cytosol	57.68	55.14
TraesCS6A01G108900.1	Wheat	cytosol	57.89	54.43
TraesCS6D01G097300.1	Wheat	cytosol	57.68	54.34
TraesCS5D01G137100.1	Wheat	cytosol	57.02	54.17
TraesCS5B01G128200.1	Wheat	cytosol	57.02	54.17
HORVU5Hr1G041930.15	Barley	cytosol	57.24	54.04
TraesCS6B01G137500.1	Wheat	cytosol	57.24	54.04
Zm00001d035377_P001	Maize	cytosol	51.32	53.67
TraesCS6D01G093400.1	Wheat	cytosol	56.36	53.54
EES09263	Sorghum	cytosol	53.07	53.3
PGSC0003DMT400022916	Potato	cytosol	60.53	53.08
TraesCS6B01G133900.1	Wheat	cytosol	55.48	53.04
Os11t0151002-00	Rice	cytosol	55.04	52.95
Solyc09g009770.2.1	Tomato	nucleus	60.53	52.57
GSMUA_Achr6P13300_001	Banana	cytosol	56.14	51.72
KRH67885	Soybean	cytosol	37.06	47.47
TraesCS6A01G104600.1	Wheat	nucleus	27.19	45.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	54.61	44.46
Bra021491.1-P	Field mustard	nucleus	45.61	42.19
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	30.04	40.29
Bra011409.1-P	Field mustard	plastid	39.04	37.71
Bra027414.1-P	Field mustard	nucleus	46.05	36.46
Bra014570.1-P	Field mustard	nucleus	44.52	36.06
Bra034295.1-P	Field mustard	plastid	39.91	34.73
Bra002773.1-P	Field mustard	cytosol	38.6	34.71
Bra001512.1-P	Field mustard	cytosol	39.47	34.03
Bra034546.1-P	Field mustard	cytosol	39.69	32.91
Bra035643.1-P	Field mustard	cytosol	39.04	31.56

Protein Annotations

EnsemblPlants:Bra028537.1	EnsemblPlants:Bra028537.1-P	EnsemblPlantsGene:Bra028537	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF23	PFscan:PS50096	SEG:seg
UniParc:UPI000254345C	UniProt:M4EIC2	MapMan:35.1	:	:	:

Description

AT3G52870 (E=3e-222) | calmodulin-binding family protein

Coordinates

chrA02:-:939035..941945

Molecular Weight (calculated)

51238.4 Da

IEP (calculated)

8.613

GRAVY (calculated)

-0.537

Length

456 amino acids

Sequence
(BLAST)

001: MQVVAKFDFQ SPPFSHAAGE ILISPVDRRA ESFANFPEAL EGACPDSPSS LAAVKVQKVY RSYRTRRRLA DSVVVAEELW WQAMDYARLN HSTISFFDYS
101: RPETAVSRWN RVSLNASKVG KGLSIVDKAQ KLAFQHWIEA IDPRHRYGHN LHLYYEVWCK ADAGQPFFYW LDVGEGKDLD LVECPRSKLK QQCIRYLGPQ
201: EREEYEYEIV EGKIVHKLTG QFLHTMHGSE GTKWIFVMST FKKLYAGLKK KGRFHHSSFF AGGATLAAGR VVVDNGVLKT ISAYSGHYKP SDDSLDTFLS
301: FLRENAVNLD GVEVHKASED SDNYDDYFKS NGDGTKSLKK EEPTPSHAEA ETDENGNGTL EEIKRSSYQR TLSGGLESPK ADVPQKAILQ RINSKKQSKS
401: LQLGHQLMLK WSTGAGPRIG CAADYPVQLR TQALEFVNLS PRNRSSALSP TGRIDV

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.