Factsheet for Bra014570.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
plasma membrane 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88987	Canola	nucleus	96.63	98.55
AT3G58480.1	Thale cress	nucleus	85.97	84.17
VIT_08s0007g07190.t01	Wine grape	cytosol	52.22	55.16
KRH71773	Soybean	nucleus	54.71	55.0
HORVU4Hr1G074540.1	Barley	cytosol	24.33	54.58
Bra021491.1-P	Field mustard	nucleus	47.25	53.96
HORVU1Hr1G045060.3	Barley	nucleus	35.35	53.93
HORVU2Hr1G015200.2	Barley	cytosol	36.77	51.75
KRH38004	Soybean	cytosol	54.17	51.26
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	30.91	51.18
HORVU2Hr1G074420.1	Barley	cytosol	12.79	48.65
TraesCS5A01G375700.1	Wheat	cytosol	45.83	48.31
Bra027414.1-P	Field mustard	nucleus	49.38	48.26
GSMUA_Achr4P06580_001	Banana	cytosol	46.36	48.24
GSMUA_Achr4P13570_001	Banana	cytosol	46.54	48.16
Zm00001d047402_P001	Maize	cytosol	45.83	47.96
TraesCS5B01G377900.1	Wheat	cytosol	45.65	47.77
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	48.13	47.71
Bra011409.1-P	Field mustard	plastid	39.96	47.67
Os03t0374500-00	Rice	nucleus	48.31	47.14
EER92212	Sorghum	cytosol	47.96	47.04
HORVU7Hr1G052820.45	Barley	cytosol	20.6	46.96
GSMUA_Achr6P01520_001	Banana	cytosol	19.72	46.84
Bra001512.1-P	Field mustard	cytosol	43.87	46.69
HORVU5Hr1G023670.50	Barley	cytosol	20.43	46.56
Solyc10g078650.1.1	Tomato	nucleus	50.09	46.46
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	47.07	46.41
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	20.25	46.15
Solyc10g080640.1.1	Tomato	nucleus	51.33	45.66
TraesCS2A01G154900.1	Wheat	cytosol	45.65	45.57
HORVU2Hr1G028140.2	Barley	cytosol	45.83	45.5
TraesCS2D01G160200.1	Wheat	cytosol	46.0	45.36
TraesCS2B01G180000.1	Wheat	cytosol	45.83	45.1
GSMUA_Achr4P11190_001	Banana	cytosol	46.54	44.71
Os07t0633400-01	Rice	cytosol	46.36	44.62
Bra028537.1-P	Field mustard	cytosol	36.06	44.52
Bra034295.1-P	Field mustard	plastid	41.21	44.27
Bra019642.1-P	Field mustard	cytosol	35.7	44.08
PGSC0003DMT400021529	Potato	cytosol	49.73	43.75
HORVU2Hr1G028150.1	Barley	cytosol	45.83	43.65
EER97603	Sorghum	nucleus	47.78	42.5
TraesCS5D01G385200.2	Wheat	cytosol	41.56	42.01
TraesCS4D01G281600.1	Wheat	nucleus	45.29	41.6
HORVU4Hr1G074550.4	Barley	cytosol	45.12	41.5
TraesCS4A01G021000.1	Wheat	nucleus	44.94	41.48
Bra002773.1-P	Field mustard	cytosol	37.12	41.22
Bra034546.1-P	Field mustard	cytosol	40.14	41.09
HORVU3Hr1G010590.3	Barley	nucleus	21.49	40.47
HORVU5Hr1G120690.3	Barley	nucleus	21.67	40.26
Zm00001d022245_P001	Maize	cytosol	47.25	40.24
Os03t0167200-01	Rice	plasma membrane	43.34	40.0
Os10t0411500-01	Rice	plasma membrane	46.0	39.91
GSMUA_Achr6P01560_001	Banana	mitochondrion	18.83	39.7
KXG40105	Sorghum	cytosol	44.58	39.4
GSMUA_Achr3P29200_001	Banana	cytosol	44.58	39.22
Zm00001d027815_P002	Maize	nucleus	44.05	38.63
Zm00001d032981_P001	Maize	cytosol	44.94	38.57
EER94258	Sorghum	cytosol	45.65	38.24
PGSC0003DMT400060938	Potato	nucleus, plastid	47.6	38.23
TraesCS4B01G282600.2	Wheat	nucleus	45.29	38.12
GSMUA_Achr6P01510_001	Banana	nucleus	13.68	37.2
Bra035643.1-P	Field mustard	cytosol	36.77	36.7
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	9.06	34.93
Zm00001d024699_P001	Maize	nucleus	19.54	34.81
HORVU5Hr1G110660.2	Barley	mitochondrion	6.04	27.42
TraesCS2B01G401000.1	Wheat	plastid	15.99	25.94

Protein Annotations

EnsemblPlants:Bra014570.1	EnsemblPlants:Bra014570.1-P	EnsemblPlantsGene:Bra014570	PANTHER:PTHR31250	PANTHER:PTHR31250:SF14	SEG:seg
UniParc:UPI00025441CB	UniProt:M4DDK2	MapMan:35.1	:	:	:

Description

AT3G58480 (E=1e-211) | calmodulin-binding family protein

Coordinates

chrA04:-:1502608..1505247

Molecular Weight (calculated)

65247.8 Da

IEP (calculated)

6.804

GRAVY (calculated)

-0.820

Length

563 amino acids

Sequence
(BLAST)

001: MKTILRSVSF NNDNESDSTI TEPPETRKTM YNRSLSMKGT QRPNLSSEDV EDNLSSKPLT FMKEDDKYKI RQWKPLSVND HVNEFLALIS DGRYQAALKL
101: QKVYRSFRTR RRLADCAVVV EQRWWKVLDF AELKRSSISF FEIEKQETAV SRWSRARTRA AKVGKGLSKD EKARKLALQH WLEAIDPRHR YGHNLQFYYH
201: AWLHCDSYQP FFYWLDIGEG KELNHERCPR TKLYQQSIKY LGPTEREEYE VVIEDSKLIY KKSGIVLDTK EGPPDTKWIF VLSVSKIMYV GMKKKGNFQH
301: SSFLAGGATL SAGRIVVDEG VLKAVWPHSG HYLPTEENFL AFMSFLRENN VDLTDVKKSP DEDDGEHHFK VKRMPSKIKE VEEEPCDFVD AETGLSPNAK
401: PKSHAELHTL TRFHPKDKGM AEDDQDYDEE EPETPSEEGY ETAEETFIAE EEFAYPKSHL FDEDIEEYEK PVPKEKIMKR IDSHKGLKSY QLAERLHSRW
501: STGAGPRISC MRDYPSELQF RVLEQAQLSP RASSSSNPSP FAPVRSRGTS LGRSPFSQEL ERL

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.