Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G281600.1 | Wheat | nucleus | 92.81 | 92.66 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 91.99 | 92.3 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 92.48 | 84.6 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 20.75 | 82.47 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 33.17 | 80.88 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 30.56 | 75.71 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 30.56 | 75.71 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 30.39 | 75.3 |
| Os03t0167200-01 | Rice | plasma membrane | 72.06 | 72.3 |
| KXG40105 | Sorghum | cytosol | 73.86 | 70.96 |
| Zm00001d027815_P002 | Maize | nucleus | 72.71 | 69.31 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 37.75 | 57.75 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 34.8 | 57.72 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 13.56 | 56.08 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 47.71 | 51.14 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 44.44 | 51.03 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 47.06 | 50.79 |
| Bra021491.1-P | Field mustard | nucleus | 40.36 | 50.1 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 47.06 | 48.73 |
| KRH71773 | Soybean | nucleus | 41.99 | 45.89 |
| Bra027414.1-P | Field mustard | nucleus | 42.65 | 45.31 |
| Bra014570.1-P | Field mustard | nucleus | 41.5 | 45.12 |
| KRG97321 | Soybean | nucleus | 40.85 | 44.72 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 34.8 | 44.56 |
| KRH38004 | Soybean | cytosol | 43.3 | 44.54 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 35.13 | 44.51 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 21.73 | 44.48 |
| AT3G58480.1 | Thale cress | nucleus | 41.67 | 44.35 |
| Solyc01g044420.2.1 | Tomato | nucleus | 41.5 | 44.1 |
| PGSC0003DMT400080788 | Potato | nucleus | 38.89 | 43.67 |
| Bra001512.1-P | Field mustard | cytosol | 37.42 | 43.29 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 21.41 | 43.23 |
| AT3G13600.1 | Thale cress | nucleus | 42.65 | 43.14 |
| KRH58931 | Soybean | nucleus | 44.93 | 41.92 |
| Solyc10g080640.1.1 | Tomato | nucleus | 43.14 | 41.71 |
| KRH42833 | Soybean | cytosol | 44.93 | 41.6 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 44.12 | 40.3 |
| Solyc10g078650.1.1 | Tomato | nucleus | 39.87 | 40.2 |
| PGSC0003DMT400021529 | Potato | cytosol | 41.34 | 39.53 |
| Solyc01g005800.2.1 | Tomato | nucleus | 42.65 | 39.49 |
| HORVU3Hr1G049640.1 | Barley | plastid | 34.97 | 38.84 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 36.11 | 36.29 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 39.87 | 34.81 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 7.68 | 32.19 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 6.21 | 30.65 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G074550.4 | EnsemblPlantsGene:HORVU4Hr1G074550 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF5 | PFscan:PS50096 | SEG:seg | UniParc:UPI000B472F36 |
| UniProt:A0A287PNP7 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:594712882..594716468
Molecular Weight (calculated)
68335.5 Da
IEP (calculated)
10.123
GRAVY (calculated)
-0.692
Length
612 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSISYPPD DYLPADDDNS DRPFVRSLSL DNLSSLETPD SPPEMFDAVS SKRPERKGSL NDRRKEGPPL HVDTTKPRVS PKPDRECCNH KHGHSLPKYG
101: ADYLPPNSPV VGMVSPQHQA AAVRVQKVYR SFRTRRQLAD CAVLVEQRWW KLLDFALLKQ SSVSFFEVEK PETALSRWSR ARMKAAKVGK GLSKDEKAQK
201: LALQHWLEAI DPRHRYGHNL HYYYKCWLRC DSQQPFFYWL DVGEGKEINL EDHCPRWKLL QQCIRYLGPR EREFYEVTIE NKMMMYRLSR KIVDTSEGPK
301: DAKWIFVLST TKILYIGSKS KGTFQHSSFL AGGATSAAGR LVVANGILKA VWPHSGHYRP TEANFREFMK YLRKRNVDLT DVKLSPTEGE EDEWLRSSLS
401: QMDLTTEVST PVKQGDTTAQ PPRGDKKKVK AVPAAPPSTS GEAGAGSPGM KRSSSGTRLQ RKRPPRLTVS KNRLGKGAAE QGAGAFGDRL DFCKANLFTG
501: RGAEGGKEDE EPVVPQERIM HRINSKMAHK SYQLGQQLSL RWTTGVGPRI GCVRDYPPEL QFRSLEQVSL SPRAGAGPPR LGATPRQKSP CAPSPLGAAG
601: APAAPLLQHG AA
101: ADYLPPNSPV VGMVSPQHQA AAVRVQKVYR SFRTRRQLAD CAVLVEQRWW KLLDFALLKQ SSVSFFEVEK PETALSRWSR ARMKAAKVGK GLSKDEKAQK
201: LALQHWLEAI DPRHRYGHNL HYYYKCWLRC DSQQPFFYWL DVGEGKEINL EDHCPRWKLL QQCIRYLGPR EREFYEVTIE NKMMMYRLSR KIVDTSEGPK
301: DAKWIFVLST TKILYIGSKS KGTFQHSSFL AGGATSAAGR LVVANGILKA VWPHSGHYRP TEANFREFMK YLRKRNVDLT DVKLSPTEGE EDEWLRSSLS
401: QMDLTTEVST PVKQGDTTAQ PPRGDKKKVK AVPAAPPSTS GEAGAGSPGM KRSSSGTRLQ RKRPPRLTVS KNRLGKGAAE QGAGAFGDRL DFCKANLFTG
501: RGAEGGKEDE EPVVPQERIM HRINSKMAHK SYQLGQQLSL RWTTGVGPRI GCVRDYPPEL QFRSLEQVSL SPRAGAGPPR LGATPRQKSP CAPSPLGAAG
601: APAAPLLQHG AA
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.