Subcellular Localization
min:
: max
Winner_takes_all: cytosol, nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 50.0 | 58.87 |
| CDY06038 | Canola | mitochondrion, nucleus | 22.6 | 45.83 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 89.73 | 43.81 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 87.67 | 42.24 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 36.3 | 25.6 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 92.47 | 23.64 |
| EER92212 | Sorghum | cytosol | 60.96 | 15.51 |
| Zm00001d047402_P001 | Maize | cytosol | 54.79 | 14.87 |
| Os03t0374500-00 | Rice | nucleus | 53.42 | 13.52 |
| Bra021491.1-P | Field mustard | nucleus | 38.36 | 11.36 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 43.15 | 11.11 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 43.84 | 10.83 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 35.62 | 10.77 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 34.93 | 10.67 |
| PGSC0003DMT400080788 | Potato | nucleus | 39.04 | 10.46 |
| Bra001512.1-P | Field mustard | cytosol | 35.62 | 9.83 |
| KRH71773 | Soybean | nucleus | 36.99 | 9.64 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 34.93 | 9.57 |
| Bra027414.1-P | Field mustard | nucleus | 37.67 | 9.55 |
| Solyc01g005800.2.1 | Tomato | nucleus | 42.47 | 9.38 |
| Solyc01g044420.2.1 | Tomato | nucleus | 36.99 | 9.38 |
| AT3G13600.1 | Thale cress | nucleus | 38.36 | 9.26 |
| KRG97321 | Soybean | nucleus | 34.93 | 9.12 |
| Bra014570.1-P | Field mustard | nucleus | 34.93 | 9.06 |
| KRH58931 | Soybean | nucleus | 40.41 | 8.99 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 22.6 | 8.94 |
| KRH38004 | Soybean | cytosol | 36.3 | 8.91 |
| AT3G58480.1 | Thale cress | nucleus | 34.25 | 8.7 |
| KRH42833 | Soybean | cytosol | 39.04 | 8.62 |
| Solyc10g078650.1.1 | Tomato | nucleus | 34.25 | 8.24 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 37.67 | 8.21 |
| PGSC0003DMT400021529 | Potato | cytosol | 34.93 | 7.97 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 32.19 | 7.68 |
| Solyc10g080640.1.1 | Tomato | nucleus | 30.82 | 7.11 |
| HORVU3Hr1G049640.1 | Barley | plastid | 24.66 | 6.53 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 30.82 | 6.42 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 22.6 | 5.42 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 4.11 | 3.9 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 5.48 | 3.24 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 5.48 | 3.24 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 5.48 | 3.24 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 0.68 | 0.4 |
| CDY45027 | Canola | extracellular | 0.0 | 0.0 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G074410.1 | EnsemblPlantsGene:HORVU2Hr1G074410 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | UniParc:UPI000B471FBC | UniProt:A0A287IGD7 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:537376180..537376617
Molecular Weight (calculated)
16096.9 Da
IEP (calculated)
8.986
GRAVY (calculated)
-0.797
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: KREEPTVATP GSSEDAKATE ASTSSHMSEN DLQRGEQAPV PLEKILERIN SKKDMKSYQL GKQLSFKWST GAGPRIGCVR DYPSELQGHA LEQMNLSPRC
101: ATGSVCTRFA SPLRQSFNSI VTRGCENETS TSRGEFRSPL VTTKMR
101: ATGSVCTRFA SPLRQSFNSI VTRGCENETS TSRGEFRSPL VTTKMR
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.