Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80650 | Canola | extracellular | 16.67 | 2.3 |
| CDY13341 | Canola | cytosol | 33.33 | 2.21 |
| CDX68935 | Canola | plastid | 58.33 | 1.49 |
| CDY35312 | Canola | plastid | 58.33 | 1.34 |
| CDY28281 | Canola | cytosol, plastid | 58.33 | 1.26 |
| CDX77035 | Canola | plastid | 50.0 | 1.25 |
| CDY45026 | Canola | cytosol | 50.0 | 1.17 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 50.0 | 1.12 |
| Zm00001d047402_P001 | Maize | cytosol | 50.0 | 1.12 |
| TraesCS5B01G377900.1 | Wheat | cytosol | 50.0 | 1.12 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 50.0 | 1.08 |
| EER92212 | Sorghum | cytosol | 50.0 | 1.05 |
| Os03t0374500-00 | Rice | nucleus | 50.0 | 1.04 |
| CDX82532 | Canola | cytosol | 41.67 | 1.0 |
| CDY37478 | Canola | nucleus | 41.67 | 0.9 |
| CDX76252 | Canola | cytosol | 33.33 | 0.88 |
| CDX95381 | Canola | cytosol | 33.33 | 0.88 |
| CDX67541 | Canola | cytosol | 33.33 | 0.88 |
| CDY13342 | Canola | cytosol | 33.33 | 0.88 |
| CDY23623 | Canola | nucleus | 41.67 | 0.87 |
| CDX97500 | Canola | nucleus | 41.67 | 0.87 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 25.0 | 0.83 |
| CDX88987 | Canola | nucleus | 33.33 | 0.72 |
| CDY00568 | Canola | nucleus | 33.33 | 0.71 |
| CDY60813 | Canola | cytosol | 25.0 | 0.65 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 8.33 | 0.48 |
| CDX75719 | Canola | cytosol | 16.67 | 0.38 |
| TraesCS2B01G401000.1 | Wheat | plastid | 8.33 | 0.29 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 0.0 | 0.0 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 0.0 | 0.0 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 0.0 | 0.0 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 0.0 | 0.0 |
| CDY06038 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY45027 | EnsemblPlantsGene:GSBRNA2T00081278001 | ProteinID:CDY45027 | ProteinID:CDY45027.1 | UniParc:UPI0004EE8420 | UniProt:A0A078I4U1 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA08g11920DBnaA08g11920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4U1]
Coordinates
chrLK032611:-:127000..127038
Molecular Weight (calculated)
1246.6 Da
IEP (calculated)
6.410
GRAVY (calculated)
1.017
Length
12 amino acids
Sequence
(BLAST)
(BLAST)
1: MGLEVGSLSL KI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.