Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001512.1-P | Field mustard | cytosol | 85.44 | 84.31 |
| CDY60813 | Canola | cytosol | 62.07 | 70.13 |
| CDY37478 | Canola | nucleus | 74.14 | 69.73 |
| CDX97500 | Canola | nucleus | 75.86 | 68.75 |
| CDY23623 | Canola | nucleus | 74.52 | 67.77 |
| AT3G13600.1 | Thale cress | nucleus | 76.44 | 65.95 |
| CDX82532 | Canola | cytosol | 49.43 | 51.39 |
| PGSC0003DMT400080788 | Potato | nucleus | 46.74 | 44.77 |
| CDY06038 | Canola | mitochondrion, nucleus | 6.13 | 44.44 |
| KRH58931 | Soybean | nucleus | 55.75 | 44.36 |
| KRH42833 | Soybean | cytosol | 55.94 | 44.18 |
| Solyc01g044420.2.1 | Tomato | nucleus | 46.74 | 42.36 |
| KRG97321 | Soybean | nucleus | 45.02 | 42.04 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 52.87 | 41.19 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 27.78 | 40.06 |
| Solyc01g005800.2.1 | Tomato | nucleus | 48.66 | 38.43 |
| CDX88987 | Canola | nucleus | 40.23 | 38.04 |
| CDX68935 | Canola | plastid | 33.91 | 37.74 |
| CDY00568 | Canola | nucleus | 40.04 | 37.32 |
| CDX77035 | Canola | plastid | 33.72 | 36.74 |
| CDX76252 | Canola | cytosol | 30.65 | 35.09 |
| CDY13342 | Canola | cytosol | 30.46 | 34.87 |
| CDX67541 | Canola | cytosol | 30.46 | 34.87 |
| CDX95381 | Canola | cytosol | 30.27 | 34.65 |
| CDY35312 | Canola | plastid | 34.67 | 34.61 |
| CDY45026 | Canola | cytosol | 33.72 | 34.17 |
| CDY28281 | Canola | cytosol, plastid | 34.67 | 32.5 |
| CDX80650 | Canola | extracellular | 5.17 | 31.03 |
| CDY13341 | Canola | cytosol | 8.05 | 23.2 |
| CDY45027 | Canola | extracellular | 0.38 | 16.67 |
Protein Annotations
| EnsemblPlants:CDX75719 | EnsemblPlantsGene:GSBRNA2T00123636001 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | ProteinID:CDX75719 | ProteinID:CDX75719.1 |
| SEG:seg | UniParc:UPI0004EE99FC | MapMan:35.1 | : | : | : |
Description
BnaC03g38020D
Coordinates
chrLK031805:+:172685..174820
Molecular Weight (calculated)
59004.6 Da
IEP (calculated)
7.581
GRAVY (calculated)
-0.467
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLFSCPFA EQEDVESALD SITVKSVNFN NKTLEPTILK GSGGKMVVEK SVSFKGMQLE RMISLNRSLF KEDHTKENGL HELDNGISVL DPSNPKHEAA
101: IKLQKVYKSF RTRRKLADCA VLVEQSWWKL LDFAELKRSS ISFFEIEKHE TAVCQRMKRH RSLLYNTGLK RLIRDIGMDT TCTFTTTSGF TVRVENLSST
201: GSLILARGKK LILWRSYLGP MERKAYEVVV EEGKFFYKNS GEMLQTSSME EGDSKWIFVL STSKVLYIGK KKKGVFQHSS FLAGGATVAA GRLVVENGVL
301: KAVWPHSGHY QPTEENFLDF LSFLGENNVD ITDVKMSPTD EDEFSIYNKR STHMRNHSLE EDLEAEKTVM ADPREEESTT VMAVVETPKK MESLSTFDLE
401: QESKPSEESL PRGGGEEEAK ESEVVKIPEE SILKRINSKK ETRSFQLGKQ LSCKWTTGAG PRIGCVRDYP SELQLQALEQ VNLSPRSASV SRLYFSFSSQ
501: RQMPRMSPLW RGMSLPADIT QL
101: IKLQKVYKSF RTRRKLADCA VLVEQSWWKL LDFAELKRSS ISFFEIEKHE TAVCQRMKRH RSLLYNTGLK RLIRDIGMDT TCTFTTTSGF TVRVENLSST
201: GSLILARGKK LILWRSYLGP MERKAYEVVV EEGKFFYKNS GEMLQTSSME EGDSKWIFVL STSKVLYIGK KKKGVFQHSS FLAGGATVAA GRLVVENGVL
301: KAVWPHSGHY QPTEENFLDF LSFLGENNVD ITDVKMSPTD EDEFSIYNKR STHMRNHSLE EDLEAEKTVM ADPREEESTT VMAVVETPKK MESLSTFDLE
401: QESKPSEESL PRGGGEEEAK ESEVVKIPEE SILKRINSKK ETRSFQLGKQ LSCKWTTGAG PRIGCVRDYP SELQLQALEQ VNLSPRSASV SRLYFSFSSQ
501: RQMPRMSPLW RGMSLPADIT QL
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.