Factsheet for VIT_06s0004g00690.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60813	Canola	cytosol	45.82	66.45
CDY37478	Canola	nucleus	53.13	64.14
Bra021491.1-P	Field mustard	nucleus	46.87	63.69
Bra027414.1-P	Field mustard	nucleus	54.33	63.19
CDX97500	Canola	nucleus	54.33	63.19
CDY23623	Canola	nucleus	54.03	63.07
PGSC0003DMT400080788	Potato	nucleus	50.9	62.57
Solyc01g044420.2.1	Tomato	nucleus	53.13	61.81
KRH58931	Soybean	nucleus	59.55	60.82
Bra001512.1-P	Field mustard	cytosol	47.91	60.68
VIT_08s0007g07190.t01	Wine grape	cytosol	47.91	60.23
KRH42833	Soybean	cytosol	58.96	59.76
AT3G13600.1	Thale cress	nucleus	53.88	59.67
KRG97321	Soybean	nucleus	49.55	59.39
HORVU2Hr1G074420.1	Barley	cytosol	12.99	58.78
HORVU2Hr1G015200.2	Barley	cytosol	34.48	57.75
GSMUA_Achr4P13570_001	Banana	cytosol	46.57	57.35
GSMUA_Achr6P01520_001	Banana	cytosol	20.15	56.96
GSMUA_Achr4P06580_001	Banana	cytosol	45.67	56.56
Solyc01g005800.2.1	Tomato	nucleus	55.67	56.43
HORVU1Hr1G045060.3	Barley	nucleus	30.9	56.1
VIT_09s0002g04560.t01	Wine grape	cytosol	26.42	56.01
TraesCS5A01G375700.1	Wheat	cytosol	44.48	55.81
TraesCS5B01G377900.1	Wheat	cytosol	44.18	55.02
HORVU4Hr1G074540.1	Barley	cytosol	20.6	54.98
Zm00001d047402_P001	Maize	cytosol	43.43	54.09
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	45.52	53.7
Os03t0374500-00	Rice	nucleus	45.67	53.03
CDX75719	Canola	cytosol	41.19	52.87
EER92212	Sorghum	cytosol	44.93	52.44
Os07t0633400-01	Rice	cytosol	45.67	52.31
TraesCS2A01G154900.1	Wheat	cytosol	44.03	52.3
TraesCS2D01G160200.1	Wheat	cytosol	44.33	52.01
TraesCS2B01G180000.1	Wheat	cytosol	44.33	51.92
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	44.18	51.84
HORVU2Hr1G028140.2	Barley	cytosol	43.58	51.5
GSMUA_Achr4P11190_001	Banana	cytosol	44.63	51.02
HORVU7Hr1G052820.45	Barley	cytosol	18.81	51.01
HORVU5Hr1G023670.50	Barley	cytosol	18.66	50.61
HORVU4Hr1G052500.37	Barley	cytosol, nucleus	18.66	50.61
HORVU2Hr1G028150.1	Barley	cytosol	43.58	49.41
TraesCS5D01G385200.2	Wheat	cytosol	40.45	48.65
VIT_13s0074g00760.t01	Wine grape	nucleus	31.94	47.87
EER97603	Sorghum	nucleus	44.63	47.24
HORVU3Hr1G010590.3	Barley	nucleus	21.04	47.16
HORVU5Hr1G120690.3	Barley	nucleus	21.19	46.86
GSMUA_Achr3P29200_001	Banana	cytosol	44.63	46.72
VIT_08s0007g03630.t01	Wine grape	cytosol	31.94	45.73
Zm00001d022245_P001	Maize	cytosol	45.07	45.69
TraesCS4D01G281600.1	Wheat	nucleus	41.79	45.68
CDX82532	Canola	cytosol	34.18	45.62
Os10t0411500-01	Rice	plasma membrane	44.03	45.45
VIT_11s0016g01970.t01	Wine grape	cytosol	36.27	45.42
Os03t0167200-01	Rice	plasma membrane	41.34	45.41
TraesCS4A01G021000.1	Wheat	nucleus	41.19	45.25
Zm00001d032981_P001	Maize	cytosol	43.73	44.66
GSMUA_Achr6P01560_001	Banana	mitochondrion	17.76	44.57
KXG40105	Sorghum	cytosol	42.09	44.27
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	35.67	44.26
HORVU4Hr1G074550.4	Barley	cytosol	40.3	44.12
Zm00001d027815_P002	Maize	nucleus	41.64	43.46
EER94258	Sorghum	cytosol	43.28	43.15
TraesCS4B01G282600.2	Wheat	nucleus	41.94	42.0
GSMUA_Achr6P01510_001	Banana	nucleus	12.24	39.61
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	8.21	37.67
Zm00001d024699_P001	Maize	nucleus	17.76	37.66
TraesCS2B01G401000.1	Wheat	plastid	17.46	33.72
HORVU5Hr1G110660.2	Barley	mitochondrion	5.97	32.26
VIT_09s0002g01680.t01	Wine grape	plastid	37.76	25.1

Protein Annotations

ArrayExpress:VIT_06s0004g00690	EMBL:FN594951	EnsemblPlants:VIT_06s0004g00690.t01	EnsemblPlantsGene:VIT_06s0004g00690	EntrezGene:100250050	PANTHER:PTHR31250
PANTHER:PTHR31250:SF4	ProteinID:CCB43799	ProteinID:CCB43799.1	RefSeq:XP_010651374.1	SEG:seg	UniParc:UPI00021091D1
UniProt:F6GUK4	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6:-:818852..822710

Molecular Weight (calculated)

75047.6 Da

IEP (calculated)

8.454

GRAVY (calculated)

-0.647

Length

670 amino acids

Sequence
(BLAST)

001: MGISFSCPFS ESNDLETGLE SVVVKSISFG DNEVKTAKRS VSFNGRNSEP TIMRSLGSGK MILEGSVSFE RGELETKVLI KAPSLDKEKS MITRSASTEQ
101: NQVDNYSSRS DITTEMIPRS PLSDSSHPKH EAALKLQKVY KSFRTRRKLA DCAVLIVQNW WQLLDFAELK HSSISFFEIE KHESAISRWS RARTRAAKVG
201: KGLSKSDRAQ KLALQHWLEA IDPRHRYGHN LHFYYVQWLH CQSREPFFYW LDIGEGREVN IEKCPRSKLQ QQCIKYLGPM ERKTYEVVVE GGKLFYKQTG
301: ELLDTTGESK DAKWIFVLST SKTLYVGKKK KGTFQHSSFL AGGATSAAGR LVVENGILKA VWPHSGHYRP TEENFQDFVS FLKENNVDLT DVKMSPADGE
401: DEELVKQSSV CLRSLSSEED LTDKAKGTEE NLNQEKIGLA EAEPAAVSEM PKSWRSSSLG KSLTNIKIPK RGELFQRSEN GNLAAGPGCG NDSAESPLGG
501: YESEEEETTV EQDYMPPKRS LVEEEEEHDI KATPKESILR RINSQKGMEL YQLGRQLSCK WTTGAGPRIS CVRDHPSKLQ VRALEHVNLS PRSAGHCRSE
601: FSPRSSIELN PPKVSTPISY SSGTPPPASS PVFEKGVLPH RSIHHSKTPF SPLSRGSDRS TIFPCRQIYS

Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)

001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS

Arabidopsis Description

IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.