Factsheet for GSMUA_Achr3P29200_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P13570_001	Banana	cytosol	53.59	63.05
GSMUA_Achr4P06580_001	Banana	cytosol	52.34	61.92
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	52.34	58.98
GSMUA_Achr6P01520_001	Banana	cytosol	21.72	58.65
GSMUA_Achr4P11190_001	Banana	cytosol	52.03	56.83
Bra021491.1-P	Field mustard	nucleus	40.16	52.13
VIT_08s0007g07190.t01	Wine grape	cytosol	42.81	51.41
Bra027414.1-P	Field mustard	nucleus	44.53	49.48
GSMUA_Achr8P24930_001	Banana	cytosol	29.53	49.09
GSMUA_Achr4P09170_001	Banana	cytosol	36.72	48.35
AT3G13600.1	Thale cress	nucleus	44.53	47.11
GSMUA_Achr3P03060_001	Banana	cytosol	27.97	46.86
GSMUA_Achr6P01560_001	Banana	mitochondrion	19.53	46.82
GSMUA_Achr8P05470_001	Banana	plastid	36.41	46.69
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	37.19	46.67
GSMUA_Achr8P26270_001	Banana	plastid	34.84	46.46
GSMUA_Achr3P25890_001	Banana	mitochondrion	37.5	46.33
Bra001512.1-P	Field mustard	cytosol	38.12	46.12
Solyc01g044420.2.1	Tomato	nucleus	40.94	45.49
KRG97321	Soybean	nucleus	39.69	45.44
AT3G58480.1	Thale cress	nucleus	40.78	45.39
KRH71773	Soybean	nucleus	39.38	45.0
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	37.5	44.78
VIT_06s0004g00690.t01	Wine grape	nucleus	46.72	44.63
Bra014570.1-P	Field mustard	nucleus	39.22	44.58
PGSC0003DMT400080788	Potato	nucleus	37.81	44.4
KRH58931	Soybean	nucleus	45.31	44.21
KRH42833	Soybean	cytosol	45.47	44.02
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	34.84	43.13
KRH38004	Soybean	cytosol	40.0	43.03
GSMUA_Achr6P05460_001	Banana	cytosol	36.56	43.01
GSMUA_Achr10P...	Banana	endoplasmic reticulum	34.69	42.94
GSMUA_Achr6P13300_001	Banana	cytosol	31.41	40.61
Solyc10g080640.1.1	Tomato	nucleus	39.69	40.13
Solyc01g005800.2.1	Tomato	nucleus	41.41	40.09
Solyc10g078650.1.1	Tomato	nucleus	37.34	39.37
PGSC0003DMT400021529	Potato	cytosol	37.97	37.97
GSMUA_Achr6P01510_001	Banana	nucleus	12.03	37.2
Zm00001d024699_P001	Maize	nucleus	18.12	36.71
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	29.69	33.93
PGSC0003DMT400060938	Potato	nucleus, plastid	36.56	33.38
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	36.41	25.86

Protein Annotations

EnsemblPlants:GSMUA_Achr3P29200_001	EnsemblPlants:GSMUA_Achr3T29200_001	EnsemblPlantsGene:GSMUA_Achr3G29200_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF4	PFscan:PS50096	SEG:seg
UniParc:UPI000294ACF2	UniProt:M0SIT6	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G29200_001]

Coordinates

chr3:+:28428970..28432387

Molecular Weight (calculated)

71335.9 Da

IEP (calculated)

9.606

GRAVY (calculated)

-0.582

Length

640 amino acids

Sequence
(BLAST)

001: MRYLKSRALP SHVHIHSYDS INDTLEVLIK KSVSFRDVVK SKQRSISFDG RDPEAAILQA FGPGNLLIKG SVSFNGRFLE TKASVKSPKP TNSANPRSFR
101: CSPLKKRSLE STLVGPDSPK HDAALKLQKV YRSFRTRRQL ADCAVLVEQR WWKLLDFALL RRSSVSFFEI EKPESAVSRW SRARTRAAKV GKGLSKDEKA
201: QKLALQHWLE AIDPRHRYGH NLQFYYNCWL QCKSLQPFFY WLEVNLEEQC TRSKLQQQCI KYLGPTEREA FEVVIEDGKL MYRQSRQPLH TSDDGSKDVK
301: WIFVLSTSKN LYVAQKRKGT FQHSSFLAGG ATSAAGQLVV VNGDLKAVWP HSGHYRPTEE NFQEFMSYLE ENNVDLTYVK KSPTGEEEDE VYGPETISFI
401: GTDISSAEEV NSSSYLSDLK LGGGEEEAKG SIDMQQNCKL HKKISVNDHE ENEEESSNSN EQYIFRKKNL FAEEEGEDLG KQLSCRWTTG AGPRIGCVRD
501: YPWELQFRAL EQVNLSTTRS PTLSLFPAAS LLASAGLKTA PTTAAAPSTP PLPSGRSISG SGSRWPSSTS WKPSPSPPIR NSSPPFSRAA PMPARSASAA
601: SSTTRLPRPA SSPTPWSPTP WFSSTAGAAN SVSLVACSTK

Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)

001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS

Arabidopsis Description

IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.