Factsheet for GSMUA_Achr6P05460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
plastid 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	56.43	60.2
GSMUA_Achr4P09170_001	Banana	cytosol	52.76	59.05
GSMUA_Achr8P24930_001	Banana	cytosol	41.18	58.18
GSMUA_Achr8P26270_001	Banana	plastid	50.37	57.08
GSMUA_Achr8P05470_001	Banana	plastid	51.65	56.31
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	55.33	56.16
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	53.12	55.9
GSMUA_Achr3P25890_001	Banana	mitochondrion	53.12	55.79
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.39	55.13
GSMUA_Achr3P03060_001	Banana	cytosol	33.27	47.38
GSMUA_Achr6P01520_001	Banana	cytosol	20.4	46.84
GSMUA_Achr4P13570_001	Banana	cytosol	43.38	43.38
GSMUA_Achr4P06580_001	Banana	cytosol	43.01	43.25
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	42.83	41.02
GSMUA_Achr6P13300_001	Banana	cytosol	36.95	40.61
GSMUA_Achr6P01560_001	Banana	mitochondrion	19.49	39.7
GSMUA_Achr4P11190_001	Banana	cytosol	42.1	39.08
CDX80650	Canola	extracellular	6.07	37.93
GSMUA_Achr3P29200_001	Banana	cytosol	43.01	36.56
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	35.66	34.64
GSMUA_Achr6P01510_001	Banana	nucleus	12.13	31.88
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	52.39	31.63

Protein Annotations

EnsemblPlants:GSMUA_Achr6P05460_001	EnsemblPlants:GSMUA_Achr6T05460_001	EnsemblPlantsGene:GSMUA_Achr6G05460_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25	SEG:seg
UniParc:UPI0002950AE8	UniProt:M0T4E4	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G05460_001]

Coordinates

chr6:+:3674045..3676938

Molecular Weight (calculated)

61403.0 Da

IEP (calculated)

8.648

GRAVY (calculated)

-0.475

Length

544 amino acids

Sequence
(BLAST)

001: MVLSLSLPRG SWIEVMRSMF SNLVEEIADV PTMSTGCSEK GGNMWLAGFQ RNDSGTKMAS AGSLTASLSF KDWESTDSKL GTAASSEDQD KEDYKKETSS
101: MRSIENVAVP NSNTSNCFLL SPNPMNEFDA AAVKLQKVYK SYRTRRNLAD CAVVIEELWW KALDFASLKH SSISFFTDGK PETAASRWAR ARTRAAKVGK
201: GLSKDHKAQK LALQHWLEAI DPRHRYGHNL NLYYDVWFKS ESTQPFFYWL DVGDGKEVIL ENCPRIKLQQ QCIKYLGPKE RRAYEVIIKD GKLFYKQSGI
301: SVNSVDGTKW IFVLSTSRTL YVGQKIKGLF QHSSFLAGGA TTAAGRLIAK EGILKRIWPY SGHYLPTEEN FKEFINFLQD NDIDLTDVEV DPYSLLFLKI
401: SMIITNSREK TIRYSINEDD ECSSLSQPRN DISKTETEEA QKPEYHETKI KPTFELGNHI QRNWTTGVGP RISCVRDYPV DLQFKALEQL NLSPKVTPCS
501: VGNSGPIPSP RPSPEIRLSP RLAQMGLPVP MISLTLPKFQ HNNN

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.