Factsheet for GSMUA_Achr3P25890_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr11P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr2P01120_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P09330_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P25040_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P07820_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P27590_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P15990_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P23670_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr8P05790_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr9P17280_001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P05470_001	Banana	plastid	70.27	72.95
GSMUA_Achr4P09170_001	Banana	cytosol	60.81	64.81
CDX75320	Canola	endoplasmic reticulum, extracellular	44.98	64.36
Zm00001d050807_P001	Maize	cytosol	17.76	64.34
GSMUA_Achr8P26270_001	Banana	plastid	59.27	63.96
Solyc03g121770.1.1	Tomato	cytosol	32.82	63.67
VIT_09s0002g04560.t01	Wine grape	cytosol	38.22	62.66
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	40.73	62.06
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	63.32	61.19
CDX68935	Canola	plastid	54.63	60.34
CDX77035	Canola	plastid	55.41	59.92
Bra011409.1-P	Field mustard	plastid	54.44	59.75
GSMUA_Achr8P24930_001	Banana	cytosol	43.82	58.96
Bra034295.1-P	Field mustard	plastid	57.92	57.25
CDY35312	Canola	plastid	57.72	57.17
Zm00001d036000_P001	Maize	cytosol	15.44	56.74
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	58.88	56.48
VIT_11s0016g01970.t01	Wine grape	cytosol	58.3	56.45
KRH12419	Soybean	cytosol, plastid	57.34	56.36
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	56.95	55.87
KRH02687	Soybean	plastid	57.14	55.85
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	54.63	55.49
AT2G26190.1	Thale cress	plastid	56.76	55.26
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	55.02	55.13
KRH19209	Soybean	cytosol	28.57	54.61
Zm00001d009755_P001	Maize	plastid	46.14	53.59
CDY45026	Canola	cytosol	52.9	53.2
AT5G57010.1	Thale cress	cytosol	50.77	53.13
GSMUA_Achr6P05460_001	Banana	cytosol	55.79	53.12
GSMUA_Achr10P...	Banana	endoplasmic reticulum	52.51	52.61
KRH44122	Soybean	nucleus	50.77	52.6
AT4G33050.5	Thale cress	plastid	56.76	52.5
KRH47098	Soybean	nucleus	50.39	52.3
TraesCS3B01G238500.1	Wheat	cytosol, plastid	54.44	52.13
Bra002773.1-P	Field mustard	cytosol	50.19	51.28
HORVU3Hr1G049640.1	Barley	plastid	54.44	51.18
TraesCS3D01G209200.2	Wheat	plastid	54.44	51.09
Zm00001d042156_P001	Maize	mitochondrion	18.73	51.05
Os01t0570800-01	Rice	plastid	55.98	50.97
CDY28281	Canola	cytosol, plastid	54.63	50.81
TraesCS3A01G206400.1	Wheat	plastid	54.44	50.72
Zm00001d044253_P001	Maize	plastid	54.44	50.18
Bra034546.1-P	Field mustard	cytosol	52.9	49.82
KRH23287	Soybean	cytosol	48.65	49.61
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	28.76	48.69
GSMUA_Achr6P01520_001	Banana	cytosol	22.01	48.1
EES03151	Sorghum	mitochondrion, plastid	53.47	48.09
KRH10031	Soybean	cytosol	43.24	47.56
GSMUA_Achr3P03060_001	Banana	cytosol	34.36	46.6
Bra035643.1-P	Field mustard	cytosol	50.39	46.28
EES18807	Sorghum	plastid	50.97	45.91
GSMUA_Achr4P06580_001	Banana	cytosol	46.91	44.92
GSMUA_Achr4P13570_001	Banana	cytosol	47.1	44.85
Zm00001d011228_P001	Maize	plastid	46.53	43.82
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	46.14	42.08
GSMUA_Achr4P11190_001	Banana	cytosol	46.33	40.96
GSMUA_Achr6P13300_001	Banana	cytosol	38.42	40.2
GSMUA_Achr6P01560_001	Banana	mitochondrion	20.08	38.95
GSMUA_Achr3P29200_001	Banana	cytosol	46.33	37.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	38.42	35.54
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	59.27	34.07
GSMUA_Achr6P01510_001	Banana	nucleus	13.13	32.85
VIT_09s0002g01680.t01	Wine grape	plastid	59.65	30.65

Protein Annotations

EnsemblPlants:GSMUA_Achr3P25890_001	EnsemblPlants:GSMUA_Achr3T25890_001	EnsemblPlantsGene:GSMUA_Achr3G25890_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	SEG:seg
UniParc:UPI000295153E	UniProt:M0SHV5	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G25890_001]

Coordinates

chr3:+:25933597..25936169

Molecular Weight (calculated)

58031.3 Da

IEP (calculated)

9.798

GRAVY (calculated)

-0.424

Length

518 amino acids

Sequence
(BLAST)

001: MGLSFSLLSW NWVGVMRSKV FGLTEAKAAV ARSISFGEKD ANRLLRSLSF RRSDSSNKMV AGAGAAAVAH DAVMERSLSF KNWEPEPTKL DATASVGDQA
101: TGDDDLLEFS SPRPLSELDA AATTVQKVYK SYRTRRNLAD CAVVVEELWW KALDFASLKR SSVSFFDVEK PETAISKWAR AKKRLARVGK GLSKDEKAQK
201: LALQHWLEAI DPRHRYGHNL HLYYDVWFGS ESSQPFFYWL DVGDGREVNL EKCPRNKLQG QCITYLGPKE REAYEVTVEN GKLVYRQNAK PVNTTEGSKW
301: IFVLSTSRAL YVGQKNKGTF QHSSFLAGAA TTAAGRMVAK EGILKAIWPY SGHYLPTEDN FREFISFLKD HNVDLTDVKK CSVDDDEFPV LDKERSKPAV
401: AAEEEMVGEK AAEAKDERKT VALGLELGRR LSCRWTTGTG ARIGCVRDYP VDLQSMALEQ VNLSPRVAPS PVGVKLPIPS PRPSPKVRLS PRLQYMGIPT
501: PTVRLTLPKL KREFFHFR

Best Arabidopsis Sequence Match ( AT4G33050.5 )
(BLAST)

001: MLRSLSHHYI HIPSSVLSPK NKNHSFILYS FKLLCFLSKQ TPRNVCFVFD THTRGFSILN ILWNYPFVIL VVMGLEVGSL CFKLKDGGLT SRTNSFKRDD
101: TNRHQNSPKS TMERSLSFNS WEVPKETKTD SDFEVLETKK STPNTLNGRN CERIQIKKPT VTPPEPFVFF SPRPVTELDA AATTLQKVYK SYRTRRNLAD
201: CAVVVEELWW RTLEGAALDL SSVSFFGEEK HETAVSKWAR ARKRAAKVGK GLSKDEKAQK LALQHWLEAI DPRHRYGHNL HFYYDVWSAS KSTQPFFYWL
301: DIGDGKDVNL EKHPRSVLQK QCIRYLGPME REAYEVIVED GRLMYKQGMT LINSTEEAKS IFVLSTTRNL YVGIKKKGLF QHSSFLSGGA TTAAGRLVAR
401: DGILEAIWPY SGHYLPTEDN FKEFISFLEE HNVDLTNVKR CSVNEEYSSF KSTADEEEER KEVSEEVEIP SEKEERARPV FDPVKRLSCK WTSGYGPRIG
501: CVRDYPMELQ AQALEQVSLS PRVSPANSYG PIPSPRPSPK VRVSPRLAYM GIPSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.