Factsheet for Zm00001d011228_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	Zm00001d005003_P002	AT5G21274.1	21798944
AT5G57010.1	Zm00001d008278_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d010649_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d028948_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038543_P004	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038545_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d041430_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d043144_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d047597_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d052415_P001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044253_P001	Maize	plastid	77.82	76.16
TraesCS3B01G238500.1	Wheat	cytosol, plastid	60.36	61.37
HORVU3Hr1G049640.1	Barley	plastid	61.45	61.34
TraesCS3D01G209200.2	Wheat	plastid	61.09	60.87
TraesCS3A01G206400.1	Wheat	plastid	61.45	60.79
Zm00001d050807_P001	Maize	cytosol	14.36	55.24
Zm00001d009755_P001	Maize	plastid	44.36	54.71
CDX75320	Canola	endoplasmic reticulum, extracellular	34.73	52.76
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	31.09	50.29
CDX68935	Canola	plastid	42.18	49.47
Bra011409.1-P	Field mustard	plastid	42.18	49.15
Zm00001d042156_P001	Maize	mitochondrion	16.91	48.95
KRH19209	Soybean	cytosol	23.64	47.97
GSMUA_Achr8P26270_001	Banana	plastid	41.64	47.71
VIT_09s0002g04560.t01	Wine grape	cytosol	27.27	47.47
CDX77035	Canola	plastid	41.27	47.39
Zm00001d036000_P001	Maize	cytosol	12.0	46.81
GSMUA_Achr3P25890_001	Banana	mitochondrion	43.82	46.53
Solyc03g121770.1.1	Tomato	cytosol	22.55	46.44
GSMUA_Achr8P05470_001	Banana	plastid	41.27	45.49
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	44.55	45.37
CDY45026	Canola	cytosol	42.18	45.05
CDY35312	Canola	plastid	42.73	44.93
Bra034295.1-P	Field mustard	plastid	42.73	44.85
AT2G26190.1	Thale cress	plastid	42.91	44.36
VIT_11s0016g01970.t01	Wine grape	cytosol	42.73	43.93
KRH12419	Soybean	cytosol, plastid	41.64	43.45
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	41.27	42.99
AT5G57010.1	Thale cress	cytosol	38.55	42.83
KRH02687	Soybean	plastid	41.09	42.64
Bra034546.1-P	Field mustard	cytosol	42.18	42.18
CDY28281	Canola	cytosol, plastid	42.55	42.01
AT4G33050.5	Thale cress	plastid	42.55	41.79
Bra002773.1-P	Field mustard	cytosol	38.36	41.62
KRH47098	Soybean	nucleus	37.45	41.28
KRH44122	Soybean	nucleus	37.09	40.8
KRH23287	Soybean	cytosol	36.55	39.57
Zm00001d037759_P002	Maize	mitochondrion	38.73	38.45
KRH10031	Soybean	cytosol	32.36	37.79
Bra035643.1-P	Field mustard	cytosol	38.18	37.23
Zm00001d004916_P001	Maize	cytosol	24.73	37.06
Zm00001d047402_P001	Maize	cytosol	33.64	34.39
Zm00001d052525_P001	Maize	cytosol	29.09	34.19
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	18.91	33.99
Zm00001d035377_P001	Maize	cytosol	26.18	33.03
Zm00001d022245_P001	Maize	cytosol	34.0	28.29
Zm00001d027815_P002	Maize	nucleus	32.91	28.19
Zm00001d032981_P001	Maize	cytosol	33.45	28.05
Zm00001d024699_P001	Maize	nucleus	14.36	25.0
VIT_09s0002g01680.t01	Wine grape	plastid	41.64	22.72

Protein Annotations

EnsemblPlants:Zm00001d011228_P001	EnsemblPlants:Zm00001d011228_T001	EnsemblPlantsGene:Zm00001d011228	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	ProteinID:AQK96261.1
SEG:seg	UniParc:UPI00084313B1	UniProt:A0A1D6FY32	MapMan:35.1	:	:

Description

Putative calmodulin-binding family protein

Coordinates

chr8:+:143868837..143871501

Molecular Weight (calculated)

60233.2 Da

IEP (calculated)

9.850

GRAVY (calculated)

-0.569

Length

550 amino acids

Sequence
(BLAST)

001: MTLRLLNTEH NHLLHPRPQS PRDAAALSSL LRSPRVSCSG QQSPKPKSAK MAHGGLERSL SFRNWEAASR GGGGINGARP GTLALQQQSP RRVVSVSPHP
101: HPHPQAQAMI EYISPRPRVE LDQAATTLQK AYKGLRTRRS LADGAIVAEE LWWKTVDSVY LNIKSISFFH EDRQETAASR WSRAGKRVAK VGKGLCKDDK
201: AQKLALQHWL EAIDPRHRYT TSGARAPAAS PSSTGWMSAK AETCITRNAH EASSTHSSSC TSDQYNERAA YEVVVEEGRL LYKQSGDLVN TNEESKWIFV
301: LSTSRSLYVG QKRKGKFQHS SFLSGAATSA AGRLVAKDGV LKAIWPYSGH YLPTEENFRE FIAFLEDNNV DLANVKRCSV DDDEYPSFKK QAAEGPEEPQ
401: AAGEAPAPVA TEEAAEEAVE LPAVDVVKAE DTATDTVEPS KMTMMASRPS FKWSTPTGAR IGCLQNYPAD VQSMALEQVN LSPRLAAAAP SPRLPIPSPR
501: PSPKIRLSPS LHYMGCPTPT GRRSSPKQQQ FMGFYTAPPV ALTLPKHKVK

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.