Factsheet for Bra011409.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
mitochondrion 3
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68935	Canola	plastid	98.09	98.72
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	70.76	98.24
AT4G33050.5	Thale cress	plastid	88.56	74.64
Bra034546.1-P	Field mustard	cytosol	86.65	74.36
Bra034295.1-P	Field mustard	plastid	80.08	72.14
Zm00001d050807_P001	Maize	cytosol	19.07	62.94
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	63.35	61.02
GSMUA_Achr4P09170_001	Banana	cytosol	59.32	57.61
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	65.47	57.22
GSMUA_Achr8P26270_001	Banana	plastid	57.84	56.88
KRH19209	Soybean	cytosol	32.63	56.83
GSMUA_Achr8P05470_001	Banana	plastid	59.53	56.31
GSMUA_Achr8P24930_001	Banana	cytosol	45.76	56.1
Zm00001d036000_P001	Maize	cytosol	16.31	54.61
GSMUA_Achr3P25890_001	Banana	mitochondrion	59.75	54.44
KRH12419	Soybean	cytosol, plastid	60.17	53.89
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	59.75	53.41
KRH02687	Soybean	plastid	59.75	53.21
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	60.17	52.99
Zm00001d009755_P001	Maize	plastid	48.09	50.9
Bra002773.1-P	Field mustard	cytosol	54.45	50.69
Zm00001d042156_P001	Maize	mitochondrion	20.34	50.53
TraesCS3B01G238500.1	Wheat	cytosol, plastid	57.42	50.09
TraesCS3D01G209200.2	Wheat	plastid	57.2	48.91
TraesCS3A01G206400.1	Wheat	plastid	57.2	48.56
HORVU3Hr1G049640.1	Barley	plastid	56.14	48.09
Os01t0570800-01	Rice	plastid	57.84	47.98
Solyc08g062930.1.1	Tomato	cytosol	38.98	47.18
Bra021491.1-P	Field mustard	nucleus	48.73	46.65
Zm00001d044253_P001	Maize	plastid	55.3	46.44
EES03151	Sorghum	mitochondrion, plastid	56.57	46.35
Bra035643.1-P	Field mustard	cytosol	54.87	45.92
EES18807	Sorghum	plastid	52.12	42.78
Zm00001d011228_P001	Maize	plastid	49.15	42.18
Bra027414.1-P	Field mustard	nucleus	50.42	41.32
Bra014570.1-P	Field mustard	nucleus	47.67	39.96
Bra019642.1-P	Field mustard	cytosol	37.92	39.25
Bra028537.1-P	Field mustard	cytosol	37.71	39.04
Bra001512.1-P	Field mustard	cytosol	43.43	38.75
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	58.05	30.41

Protein Annotations

EnsemblPlants:Bra011409.1	EnsemblPlants:Bra011409.1-P	EnsemblPlantsGene:Bra011409	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	SEG:seg
UniParc:UPI0002546064	UniProt:M4D4K5	MapMan:35.1	:	:	:

Description

AT4G33050 (E=2e-220) EDA39 | EDA39 (embryo sac development arrest 39); calmodulin binding

Coordinates

chrA01:+:2292067..2294194

Molecular Weight (calculated)

53578.4 Da

IEP (calculated)

8.885

GRAVY (calculated)

-0.624

Length

472 amino acids

Sequence
(BLAST)

001: MGLEVGSFSR LTSRTSSFKN PSIERSLSFN SWEIPKETKT DSGFEVSETK KSTPNTLHGR NCESLQIKKP TVTPPEPFVF FSPRPVTELD AAATTLQKVY
101: KSYRTRRNLA DCAVLVEELW WKTLDGATLD LSSVSFFKEE KHEPAASKWT RARKRAAKVG KGLSKDEKAQ KLALQHWLEA IDPRHRYGHN LHFYYDVWSA
201: SKSSQPFFYW LDIGDGKDVN LEKHPRSVLQ KQCITYLGPM EREAYEVIVE DGRLLYKQSM SPINSTEESK SIFVLSTTRT LYVGKKKKGV FQHSSFLSGG
301: ATTAAGRLVA RDGILEAIWP YSGHYLPTEE NFKEFISFLE EHNVDLTNVK RCAVNEEYSS SFKSIPDEEE EAKEISQEVE MPSEQEERAR PMFDHAKRLS
401: CKWSSGYGPR IGCVRDYPME LQTQALEQVS LSPRVSTANT YGPIPSPRPS PKVRVSPRLS YMGIPSPRAV KC

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.