Factsheet for Zm00001d009755_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

plastid: 22065420

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005003_P002
Zm00001d008278_P001
Zm00001d010649_P001
Zm00001d028948_P001
Zm00001d038543_P004
Zm00001d038545_P001
Zm00001d041430_P001
Zm00001d043144_P001
Zm00001d047597_P001
Zm00001d052415_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	Zm00001d005003_P002	AT5G21274.1	21798944
AT5G57010.1	Zm00001d008278_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d010649_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d028948_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038543_P004	AT5G21274.1	21798944
AT5G57010.1	Zm00001d038545_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d041430_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d043144_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d047597_P001	AT5G21274.1	21798944
AT5G57010.1	Zm00001d052415_P001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES18807	Sorghum	plastid	87.89	68.17
Zm00001d050807_P001	Maize	cytosol	20.85	65.03
Zm00001d036000_P001	Maize	cytosol	18.16	57.45
Solyc03g121770.1.1	Tomato	cytosol	32.96	55.06
Zm00001d042156_P001	Maize	mitochondrion	22.65	53.16
CDX75320	Canola	endoplasmic reticulum, extracellular	43.05	53.04
VIT_09s0002g04560.t01	Wine grape	cytosol	37.44	52.85
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	38.12	50.0
Zm00001d044253_P001	Maize	plastid	62.11	49.29
GSMUA_Achr8P26270_001	Banana	plastid	52.24	48.54
CDX68935	Canola	plastid	50.9	48.4
Bra011409.1-P	Field mustard	plastid	50.9	48.09
GSMUA_Achr3P25890_001	Banana	mitochondrion	53.59	46.14
GSMUA_Achr8P05470_001	Banana	plastid	51.57	46.09
CDX77035	Canola	plastid	49.1	45.72
KRH19209	Soybean	cytosol	27.35	45.02
Zm00001d011228_P001	Maize	plastid	54.71	44.36
CDY35312	Canola	plastid	51.57	43.98
Bra034295.1-P	Field mustard	plastid	51.57	43.89
CDY45026	Canola	cytosol	50.67	43.88
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	52.91	43.7
KRH12419	Soybean	cytosol, plastid	50.67	42.88
AT2G26190.1	Thale cress	plastid	51.12	42.86
KRH02687	Soybean	plastid	50.67	42.64
AT5G57010.1	Thale cress	cytosol	47.09	42.42
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	50.0	42.23
KRH47098	Soybean	nucleus	46.86	41.88
VIT_11s0016g01970.t01	Wine grape	cytosol	50.0	41.68
KRH44122	Soybean	nucleus	46.64	41.6
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	28.48	41.5
Bra034546.1-P	Field mustard	cytosol	50.9	41.27
AT4G33050.5	Thale cress	plastid	51.57	41.07
CDY28281	Canola	cytosol, plastid	51.12	40.93
Zm00001d004916_P001	Maize	cytosol	33.63	40.87
Zm00001d037759_P002	Maize	mitochondrion	50.67	40.79
KRH10031	Soybean	cytosol	43.05	40.76
Bra002773.1-P	Field mustard	cytosol	45.07	39.65
KRH23287	Soybean	cytosol	44.62	39.17
Zm00001d047402_P001	Maize	cytosol	47.09	39.03
Zm00001d035377_P001	Maize	cytosol	36.32	37.16
Zm00001d052525_P001	Maize	cytosol	38.56	36.75
Bra035643.1-P	Field mustard	cytosol	45.96	36.35
Zm00001d027815_P002	Maize	nucleus	45.74	31.78
Zm00001d022245_P001	Maize	cytosol	46.86	31.62
Zm00001d032981_P001	Maize	cytosol	45.96	31.25
Zm00001d024699_P001	Maize	nucleus	20.18	28.48
VIT_09s0002g01680.t01	Wine grape	plastid	50.0	22.12

Protein Annotations

EnsemblPlants:Zm00001d009755_P001	EnsemblPlants:Zm00001d009755_T001	EnsemblPlantsGene:Zm00001d009755	EntrezGene:103635434	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	PFscan:PS50096
ProteinID:AQK92613.1	SEG:seg	UniParc:UPI0004DEA078	UniProt:A0A1D6FLP8	MapMan:35.1	:

Description

Putative calmodulin-binding family protein

Coordinates

chr8:+:79837610..79839037

Molecular Weight (calculated)

49007.3 Da

IEP (calculated)

10.058

GRAVY (calculated)

-0.421

Length

446 amino acids

Sequence
(BLAST)

001: MMTLPTSPGA ASAVDDDMPM PVRSPKLLRT NSSKKVAAAS NLERALLSFK SWEATKPPAV PPSPVVRRIH GARPGRLALS SPTPATERDD GADDTAVLRS
101: PLHDAAATRV QKMFKGHRTR RTLADCAIVI EELWWKLCDS ASLDRTSISF FAATAGGGKQ ETAASRWVRA GKRIAKVGKG LSKDEKAQKL ALRHWLEAID
201: PRHRYGHNLH LYYDMWFQSS STEPFFYWLD IGGGREIHHP SCPRSKLNAQ LVMYLGMAER AAYQVVVADG RLTYLHTGLP VHTTDDSKWI FVLSTTRSLY
301: VGQKRKGQFQ HSSFLAGGAT SAAGRLVAKD GVLKAIWPYS GHYLPTEENF NEFIAFLRDN NVDLTDVKRC SVDDDECPLS KPAAGAVVAK WTSGAGARIG
401: CVRDYPAELQ SRALEQVNLS PRVQHTGAPP LKQQQGRQAS HSDGSR

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.