CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011409.1-P	Field mustard	plastid	98.72	98.09
CDX75320	Canola	endoplasmic reticulum, extracellular	74.41	96.41
CDY45026	Canola	cytosol	86.78	79.03
CDY28281	Canola	cytosol, plastid	90.41	76.12
CDX77035	Canola	plastid	76.76	75.16
AT4G33050.5	Thale cress	plastid	89.13	74.64
CDY35312	Canola	plastid	80.81	72.47
Zm00001d050807_P001	Maize	cytosol	18.98	62.24
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	63.54	60.82
CDY45027	Canola	extracellular	1.49	58.33
GSMUA_Achr4P09170_001	Banana	cytosol	59.49	57.41
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	66.1	57.41
GSMUA_Achr8P26270_001	Banana	plastid	58.64	57.29
KRH19209	Soybean	cytosol	32.84	56.83
GSMUA_Achr8P24930_001	Banana	cytosol	46.27	56.36
GSMUA_Achr8P05470_001	Banana	plastid	59.7	56.11
GSMUA_Achr3P25890_001	Banana	mitochondrion	60.34	54.63
Zm00001d036000_P001	Maize	cytosol	16.2	53.9
KRH12419	Soybean	cytosol, plastid	60.55	53.89
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	60.13	53.41
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	60.77	53.17
KRH02687	Soybean	plastid	59.91	53.02
Zm00001d009755_P001	Maize	plastid	48.4	50.9
TraesCS3B01G238500.1	Wheat	cytosol, plastid	58.0	50.28
Zm00001d042156_P001	Maize	mitochondrion	20.26	50.0
CDY60813	Canola	cytosol	48.61	49.35
TraesCS3D01G209200.2	Wheat	plastid	57.78	49.09
TraesCS3A01G206400.1	Wheat	plastid	57.78	48.74
HORVU3Hr1G049640.1	Barley	plastid	56.72	48.28
Os01t0570800-01	Rice	plastid	58.21	47.98
Solyc08g062930.1.1	Tomato	cytosol	39.23	47.18
EES03151	Sorghum	mitochondrion, plastid	57.14	46.53
Zm00001d044253_P001	Maize	plastid	55.65	46.44
CDY13341	Canola	cytosol	16.63	43.09
CDY37478	Canola	nucleus	50.75	42.88
EES18807	Sorghum	plastid	52.45	42.78
Zm00001d011228_P001	Maize	plastid	49.47	42.18
CDY23623	Canola	nucleus	50.75	41.46
CDX97500	Canola	nucleus	50.75	41.32
CDX88987	Canola	nucleus	47.97	40.76
CDY00568	Canola	nucleus	47.97	40.18
CDX95381	Canola	cytosol	38.17	39.25
CDX76252	Canola	cytosol	37.95	39.04
CDY13342	Canola	cytosol	37.95	39.04
CDX67541	Canola	cytosol	37.95	39.04
CDY06038	Canola	mitochondrion, nucleus	5.76	37.5
CDX80650	Canola	extracellular	6.82	36.78
CDX75719	Canola	cytosol	37.74	33.91
CDX82532	Canola	cytosol	34.97	32.67
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	58.42	30.41

Protein Annotations

EnsemblPlants:CDX68935	EnsemblPlantsGene:GSBRNA2T00130679001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	ProteinID:CDX68935	ProteinID:CDX68935.1
SEG:seg	UniParc:UPI0004EB13F4	MapMan:35.1	:	:	:

Description

BnaC01g05180D

Coordinates

chrLK031789:-:2109295..2111848

Molecular Weight (calculated)

53230.0 Da

IEP (calculated)

8.885

GRAVY (calculated)

-0.624

Length

469 amino acids

Sequence
(BLAST)

001: MGLEVGSFSR LTSRTSSFKN PTMERSLSFN SWEIPKETKT DSGFETKKST PNALHGRNCE SLQIKKPTVT PPEPFVFFSP RPVTELDAAA TTLQKVYKSY
101: RTRRNLADCA VLVEELWWKT LDGATLDLSS VSFFKEEKHE PAASKWTRAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASKS
201: SQPFFYWLDI GDGKDVNLEK HPRSVLQKQC ITYLGPMERE AYEVIVEDGR LLYKESMSPI NSTEESKSIF VLSTTRTLYV GKKKKGVFQH SSFLSGGATT
301: AAGRLVARDG ILEAIWPYSG HYLPTEENFK EFISFLEEHN VDLTNVKRCA VNEEYSSSFK SIPDEEEEAK EISQEVEMPS EQEERARPVF DHAKRLSCKW
401: SSGYGPRIGC VRDYPMELQT QALEQVSLSP RVSPANTYGP IPSPRPSPKV RVSPRLSYMG IPSPRAVKC

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.