Factsheet for Solyc08g062930.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 4
extracellular 2
plasma membrane 2
nucleus 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plasma membrane, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75320	Canola	endoplasmic reticulum, extracellular	44.87	48.34
KRH19209	Soybean	cytosol	32.56	46.86
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	39.49	45.29
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	55.38	44.08
CDX68935	Canola	plastid	47.18	39.23
Bra011409.1-P	Field mustard	plastid	47.18	38.98
CDX77035	Canola	plastid	47.69	38.83
Solyc07g040710.2.1	Tomato	cytosol	44.36	37.12
Solyc03g121770.1.1	Tomato	cytosol	25.38	37.08
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	50.77	36.67
Solyc12g008960.1.1	Tomato	nucleus	45.9	36.31
CDY35312	Canola	plastid	47.69	35.56
CDY45026	Canola	cytosol	46.67	35.34
AT2G26190.1	Thale cress	plastid	48.21	35.34
Bra034295.1-P	Field mustard	plastid	47.44	35.31
KRH02687	Soybean	plastid	46.41	34.15
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	45.9	33.9
KRH12419	Soybean	cytosol, plastid	45.38	33.59
AT4G33050.5	Thale cress	plastid	47.95	33.39
Bra034546.1-P	Field mustard	cytosol	46.67	33.09
CDY28281	Canola	cytosol, plastid	46.41	32.5
Solyc10g085610.1.1	Tomato	cytosol	30.0	26.9
Solyc01g044420.2.1	Tomato	nucleus	37.95	25.69
Solyc10g083360.1.1	Tomato	cytosol	30.51	25.54
Solyc10g078650.1.1	Tomato	nucleus	36.41	23.39
Solyc01g005800.2.1	Tomato	nucleus	38.97	23.0
Solyc10g080640.1.1	Tomato	nucleus	36.67	22.59
Solyc09g009770.2.1	Tomato	nucleus	30.0	22.29

Protein Annotations

EnsemblPlants:Solyc08g062930.1.1	EnsemblPlantsGene:Solyc08g062930.1	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	UniParc:UPI000276B2C7	UniProt:K4CL76
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:52345987..52348199

Molecular Weight (calculated)

44336.7 Da

IEP (calculated)

9.437

GRAVY (calculated)

-0.168

Length

390 amino acids

Sequence
(BLAST)

001: MGLSLSILLS AWNEILRHSY LIFADTMRRA IVRSVESLGF RNFKAELYII FYVNKHEAVV SRWSRARKRV AKVGKGLLKD EKAQKLALQH WLEANEREAY
101: EIVVEDGKLV HKQSGMPLNT TERSKWIFVL STSRVLYVGK KKKGVFQHSN FLSGGATTAA GRLIVYDEIL ESHFALHAIC PYISHYLPTE DNFKKFINFL
201: EEHHVDLANV KVMILAMQIL TFQCSANFAP VLLMLIGKSL TFYLQNCAID NDRLLLESNK DMEKTLSQNC DTDKAKDDGM VSDVLTITAH EEKFTHTSKN
301: KTEEPVFDLT KRLSYKWISG VASCIGCVRD YSIDLQSQAL ETVNLSPRVH LSQPKNYYQI PSQRPSPKIL VSPRLAYMGL PSPRVSVTTS

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.