Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77035 | Canola | plastid | 80.64 | 89.56 |
| Bra034295.1-P | Field mustard | plastid | 85.9 | 87.21 |
| CDY35312 | Canola | plastid | 85.34 | 86.81 |
| AT4G33050.5 | Thale cress | plastid | 75.75 | 71.96 |
| PGSC0003DMT400021177 | Potato | cytosol, mitochondrion, nucleus, plastid | 57.14 | 62.04 |
| Zm00001d050807_P001 | Maize | cytosol | 16.35 | 60.84 |
| VIT_04s0008g01070.t01 | Wine grape | cytosol, extracellular, nucleus | 61.65 | 60.74 |
| GSMUA_Achr4P09170_001 | Banana | cytosol | 53.76 | 58.85 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 52.82 | 58.54 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 54.89 | 58.52 |
| KRH12419 | Soybean | cytosol, plastid | 56.39 | 56.93 |
| KRH19209 | Soybean | cytosol | 28.95 | 56.83 |
| KRH02687 | Soybean | plastid | 56.58 | 56.79 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 55.26 | 56.76 |
| KRH37419 | Soybean | cytosol, extracellular, nucleus, plastid | 56.02 | 56.44 |
| GSMUA_Achr4P08700_001 | Banana | extracellular, nucleus, plastid, vacuole | 56.77 | 56.34 |
| GSMUA_Achr8P24930_001 | Banana | cytosol | 40.23 | 55.58 |
| AT5G57010.1 | Thale cress | cytosol | 49.81 | 53.54 |
| Zm00001d036000_P001 | Maize | cytosol | 13.72 | 51.77 |
| Zm00001d009755_P001 | Maize | plastid | 42.86 | 51.12 |
| TraesCS3B01G238500.1 | Wheat | cytosol, plastid | 51.88 | 51.02 |
| TraesCS3D01G209200.2 | Wheat | plastid | 51.5 | 49.64 |
| Zm00001d042156_P001 | Maize | mitochondrion | 17.67 | 49.47 |
| HORVU3Hr1G049640.1 | Barley | plastid | 51.13 | 49.36 |
| TraesCS3A01G206400.1 | Wheat | plastid | 51.5 | 49.28 |
| Os01t0570800-01 | Rice | plastid | 52.44 | 49.03 |
| Solyc08g062930.1.1 | Tomato | cytosol | 35.34 | 48.21 |
| Zm00001d044253_P001 | Maize | plastid | 50.19 | 47.51 |
| EES03151 | Sorghum | mitochondrion, plastid | 51.32 | 47.4 |
| EES18807 | Sorghum | plastid | 46.99 | 43.48 |
| Zm00001d011228_P001 | Maize | plastid | 44.36 | 42.91 |
| AT3G58480.1 | Thale cress | nucleus | 44.36 | 41.04 |
| AT3G52870.1 | Thale cress | cytosol | 34.96 | 40.79 |
| AT3G13600.1 | Thale cress | nucleus | 45.49 | 40.0 |
| GSMUA_Achr3P32310_001 | Banana | endoplasmic reticulum | 54.7 | 32.3 |
Protein Annotations
| MapMan:35.1 | EntrezGene:817159 | ProteinID:AAC14530.1 | ProteinID:AEC07806.1 | EMBL:AF419588 | ProteinID:ANM62513.1 |
| ArrayExpress:AT2G26190 | EnsemblPlantsGene:AT2G26190 | RefSeq:AT2G26190 | TAIR:AT2G26190 | RefSeq:AT2G26190-TAIR-G | EnsemblPlants:AT2G26190.1 |
| TAIR:AT2G26190.1 | EMBL:AY097341 | EMBL:AY128282 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | RefSeq:NP_001324665.1 | RefSeq:NP_565618.1 | UniProt:O64851 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31250 |
| PANTHER:PTHR31250:SF1 | SignalP:SignalP-noTM | UniParc:UPI00000A4699 | SEG:seg | : | : |
Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
Coordinates
chr2:-:11147638..11150754
Molecular Weight (calculated)
60490.5 Da
IEP (calculated)
7.239
GRAVY (calculated)
-0.597
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.