CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01631
EES09201
EES16322
OQU78227

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	EES01631	AT5G21274.1	21798944
AT5G57010.1	EES09201	AT5G21274.1	21798944
AT5G57010.1	EES16322	AT5G21274.1	21798944
AT5G57010.1	OQU78227	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009755_P001	Maize	plastid	68.17	87.89
CDX75320	Canola	endoplasmic reticulum, extracellular	36.7	58.29
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	33.04	55.88
Solyc03g121770.1.1	Tomato	cytosol	25.57	55.06
EES03151	Sorghum	mitochondrion, plastid	54.43	54.34
VIT_09s0002g04560.t01	Wine grape	cytosol	29.39	53.48
CDX68935	Canola	plastid	42.78	52.45
Bra011409.1-P	Field mustard	plastid	42.78	52.12
GSMUA_Achr8P26270_001	Banana	plastid	43.13	51.67
KRH19209	Soybean	cytosol	24.35	51.66
GSMUA_Achr3P25890_001	Banana	mitochondrion	45.91	50.97
CDX77035	Canola	plastid	41.91	50.31
GSMUA_Achr8P05470_001	Banana	plastid	43.48	50.1
CDY35312	Canola	plastid	44.17	48.57
Bra034295.1-P	Field mustard	plastid	44.0	48.28
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	44.87	47.78
CDY45026	Canola	cytosol	42.78	47.77
AT2G26190.1	Thale cress	plastid	43.48	46.99
KRH02687	Soybean	plastid	42.96	46.6
VIT_11s0016g01970.t01	Wine grape	cytosol	43.3	46.54
AT5G57010.1	Thale cress	cytosol	40.0	46.46
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	42.61	46.4
KRH12419	Soybean	cytosol, plastid	42.43	46.3
KRH47098	Soybean	nucleus	39.83	45.89
KRH44122	Soybean	nucleus	39.83	45.8
AT4G33050.5	Thale cress	plastid	44.0	45.18
Bra034546.1-P	Field mustard	cytosol	42.96	44.91
CDY28281	Canola	cytosol, plastid	43.13	44.52
Bra002773.1-P	Field mustard	cytosol	38.96	44.18
KRH23287	Soybean	cytosol	38.78	43.9
KXG21506	Sorghum	cytosol	41.39	42.73
KRH10031	Soybean	cytosol	34.26	41.83
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	21.91	41.18
EES16640	Sorghum	cytosol	31.65	40.27
Bra035643.1-P	Field mustard	cytosol	39.48	40.25
EES09264	Sorghum	cytosol	31.3	39.56
EER92212	Sorghum	cytosol	38.61	38.68
EES09263	Sorghum	cytosol	29.22	37.0
EER97603	Sorghum	nucleus	37.57	34.12
KXG40105	Sorghum	cytosol	37.39	33.75
EER94258	Sorghum	cytosol	37.57	32.14
VIT_09s0002g01680.t01	Wine grape	plastid	43.3	24.7

Protein Annotations

MapMan:35.1	UniProt:C5YX01	EnsemblPlants:EES18807	ProteinID:EES18807	ProteinID:EES18807.2	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003684	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006259	GO:GO:0006289
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0019538
GO:GO:0031461	GO:GO:0043161	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PFscan:PS50096	PANTHER:PTHR31250
PANTHER:PTHR31250:SF1	EnsemblPlantsGene:SORBI_3009G257100	unigene:Sbi.6900	UniParc:UPI00081ACBFC	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:+:59131880..59134298

Molecular Weight (calculated)

62906.1 Da

IEP (calculated)

10.121

GRAVY (calculated)

-0.417

Length

575 amino acids

Sequence
(BLAST)

001: MTLLSPPGAL IDHPKLLPTS PSSSSSSRDH RLIFSTLSVV DDMPMPMPML PRSPKLLRTN SSKKVPAASN LERALLSFKS WETIDDATKP AAVPIPIPPS
101: PVQRRIHGAR PGRLALHSPT MAAAAAADDN SLLLLRSPLH EAAATRVQKM FKGHRTRRTL ADCAIVIEEL WWKLCDSASL DRTSISFFTA TAGGGKQETA
201: ASRWVRAGKR IAKVGKGLSK DDKAQKLALR HWLEAIDPRH RYGHNLHLYY DIWFQSSSTE PFFYWLDIGG GREIHHPSCP RTKLNSQLVM YLGINERAAY
301: QVVVDDGRLT YLQTGLPVNT TDDSKWIFVL STTRSLYVGQ KRKGHFQHSS FLAGGATSAA GRLVAKDGVL KAIWPYSGHY LPTEENFNEF IAFLQENNLD
401: LTDVKRCSVD DDEYPSLKRK HQSMAAEEEE EETAAAGAVV DGNETAGSRA AAAKWTTGAG ARIGCVRDYP AELQSRALEQ VNLSPNRPKP PCPLQSPWAG
501: KAPIPSPRPS PRIRLSPRVQ YMGVPAASPA GVRPPPHKQQ CLGLGLGIRP PTVHLTLPSN KNGSKATSTT SPANH

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.