CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	KRG89812	AT5G21274.1	21798944
AT5G57010.1	KRG94975	AT5G21274.1	21798944
AT5G57010.1	KRH18664	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10031	Soybean	cytosol	73.03	78.77
KRH47098	Soybean	nucleus	64.57	65.73
KRH44122	Soybean	nucleus	64.37	65.4
Zm00001d050807_P001	Maize	cytosol	17.13	60.84
VIT_09s0002g04560.t01	Wine grape	cytosol	35.63	57.28
Zm00001d036000_P001	Maize	cytosol	14.76	53.19
GSMUA_Achr8P24930_001	Banana	cytosol	38.78	51.17
GSMUA_Achr8P26270_001	Banana	plastid	47.24	50.0
KRH19209	Soybean	cytosol	26.57	49.82
KRH12419	Soybean	cytosol, plastid	51.57	49.72
GSMUA_Achr4P09170_001	Banana	cytosol	47.05	49.18
AT5G57010.1	Thale cress	cytosol	47.83	49.09
Zm00001d042156_P001	Maize	mitochondrion	18.31	48.95
GSMUA_Achr3P25890_001	Banana	mitochondrion	49.61	48.65
KRH02687	Soybean	plastid	50.39	48.3
GSMUA_Achr8P05470_001	Banana	plastid	47.44	48.3
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	50.2	48.3
Bra002773.1-P	Field mustard	cytosol	47.64	47.73
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	47.64	45.15
Zm00001d009755_P001	Maize	plastid	39.17	44.62
Bra035643.1-P	Field mustard	cytosol	48.03	43.26
TraesCS3B01G238500.1	Wheat	cytosol, plastid	44.88	42.14
TraesCS3D01G209200.2	Wheat	plastid	44.88	41.3
HORVU3Hr1G049640.1	Barley	plastid	44.69	41.2
TraesCS3A01G206400.1	Wheat	plastid	45.08	41.19
EES03151	Sorghum	mitochondrion, plastid	46.06	40.62
Os01t0570800-01	Rice	plastid	45.47	40.6
Zm00001d044253_P001	Maize	plastid	44.88	40.57
KRH30882	Soybean	cytosol	37.4	40.08
KRG96176	Soybean	plastid	36.61	39.83
KRH32680	Soybean	cytosol	37.8	39.75
EES18807	Sorghum	plastid	43.9	38.78
KRG97321	Soybean	nucleus	41.54	37.75
KRH71773	Soybean	nucleus	41.34	37.5
Zm00001d011228_P001	Maize	plastid	39.57	36.55
KRH38004	Soybean	cytosol	42.13	35.97
KRH58931	Soybean	nucleus	44.49	34.45
KRH42833	Soybean	cytosol	44.09	33.89
KRH67885	Soybean	cytosol	19.88	28.37
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	48.62	27.41
VIT_09s0002g01680.t01	Wine grape	plastid	52.76	26.59

Protein Annotations

EMBL:ACUP02008460	EnsemblPlants:KRH23287	EnsemblPlantsGene:GLYMA_13G348500	EntrezGene:100780310	ProteinID:KRH23287	ProteinID:KRH23287.1
UniParc:UPI000233B241	UniProt:I1M5A7	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr13:-:43866605..43870827

Molecular Weight (calculated)

57952.4 Da

IEP (calculated)

8.845

GRAVY (calculated)

-0.420

Length

508 amino acids

Sequence
(BLAST)

001: MGMFTVSKEG EVTVNFKNNI NLNDFYKPEQ STNLKRRKVG NLKLQTTFSF KHLLSENCGS QEEVEEDLFN KRSPTVMSQK QELMFSPTSS AQLDLAALMV
101: QKVYKSYRIR RILADCVVVC EELRWKDSVI TAFNRRSISN FDSDKSETAI SKWARARMMV AKVGKGLSKD DKAQKLALRH WLEAIDPRHR YGHNLHFYYL
201: VWFHSQSYQP FFYWLDVGGG KEVNLEECPR SQLQRQCIKY LGPEEREAYE VIVEGGRLVY RQSKDLVHTT EDSKWIFVLS TSRILYVGQK KKGHFQHSSF
301: LAGGATIASG RLVAQNGVLH AIWPYSGHYR PTEKNFMEFT SFLEEHKVNM TNVKRDPIDE DVPPSNPVNE ELPFEHMEGN VGARATANNC GKENVCQFGT
401: NVEENKPMSS IWSTGVGPRI GCMREYPANF QVLALELLNL SPRVNDETFA GKAPIPSPRP STKHMSLVSM GLPSPMVHVS PLQGLWTFKC IGIALVLAFK
501: NLDNWYII

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.