Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_06s0009g01910.t01 | |
| VIT_08s0040g00470.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G57010.1 | VIT_06s0009g01910.t01 | AT5G21274.1 | 21798944 |
| AT5G57010.1 | VIT_08s0040g00470.t01 | AT5G21274.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d050807_P001 | Maize | cytosol | 24.05 | 53.15 |
| GSMUA_Achr8P24930_001 | Banana | cytosol | 59.81 | 49.09 |
| Zm00001d036000_P001 | Maize | cytosol | 19.94 | 44.68 |
| GSMUA_Achr8P26270_001 | Banana | plastid | 64.56 | 42.5 |
| Zm00001d042156_P001 | Maize | mitochondrion | 25.32 | 42.11 |
| GSMUA_Achr4P09170_001 | Banana | cytosol | 63.29 | 41.15 |
| GSMUA_Achr8P05470_001 | Banana | plastid | 63.29 | 40.08 |
| KRH47098 | Soybean | nucleus | 62.97 | 39.88 |
| KRH44122 | Soybean | nucleus | 62.97 | 39.8 |
| VIT_04s0008g01070.t01 | Wine grape | cytosol, extracellular, nucleus | 67.72 | 39.63 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 66.77 | 39.44 |
| KRH10031 | Soybean | cytosol | 57.28 | 38.43 |
| GSMUA_Achr3P25890_001 | Banana | mitochondrion | 62.66 | 38.22 |
| AT5G57010.1 | Thale cress | cytosol | 59.18 | 37.78 |
| Zm00001d009755_P001 | Maize | plastid | 52.85 | 37.44 |
| GSMUA_Achr4P08700_001 | Banana | extracellular, nucleus, plastid, vacuole | 63.29 | 37.31 |
| Bra002773.1-P | Field mustard | cytosol | 58.54 | 36.49 |
| KRH23287 | Soybean | cytosol | 57.28 | 35.63 |
| VIT_13s0074g00760.t01 | Wine grape | nucleus | 49.37 | 34.9 |
| Bra035643.1-P | Field mustard | cytosol | 59.49 | 33.33 |
| TraesCS3B01G238500.1 | Wheat | cytosol, plastid | 56.96 | 33.27 |
| Os01t0570800-01 | Rice | plastid | 59.18 | 32.86 |
| TraesCS3D01G209200.2 | Wheat | plastid | 57.28 | 32.79 |
| TraesCS3A01G206400.1 | Wheat | plastid | 57.28 | 32.55 |
| HORVU3Hr1G049640.1 | Barley | plastid | 56.33 | 32.3 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 54.11 | 32.08 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 47.15 | 31.84 |
| Zm00001d044253_P001 | Maize | plastid | 55.06 | 30.96 |
| EES03151 | Sorghum | mitochondrion, plastid | 56.01 | 30.73 |
| EES18807 | Sorghum | plastid | 53.48 | 29.39 |
| Zm00001d011228_P001 | Maize | plastid | 47.47 | 27.27 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 56.01 | 26.42 |
| VIT_09s0002g01680.t01 | Wine grape | plastid | 79.75 | 25.0 |
| GSMUA_Achr3P32310_001 | Banana | endoplasmic reticulum | 64.87 | 22.75 |
Protein Annotations
| ArrayExpress:VIT_09s0002g04560 | EMBL:FN596494 | EnsemblPlants:VIT_09s0002g04560.t01 | EnsemblPlantsGene:VIT_09s0002g04560 | EntrezGene:100261674 | EntrezGene:LOC100261674 |
| PANTHER:PTHR31250 | PANTHER:PTHR31250:SF25 | ProteinID:CBI36148 | ProteinID:CBI36148.3 | RefSeq:XP_002279600 | RefSeq:XP_002279600.1 |
| UniParc:UPI00015C8AA6 | UniProt:D7U0K2 | wikigene:100261674 | wikigene:LOC100261674 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr9:+:4138840..4140754
Molecular Weight (calculated)
35655.4 Da
IEP (calculated)
8.082
GRAVY (calculated)
-0.399
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKSDGSDEM VIREVKELEP ETSVSVKSMV LDGEKPLPAP AILFSPRPVS ELDAAAVKLQ KVYKSYRTRR NLADCAVVVE ELWWKALDFA RLKESSVSFF
101: NTEKPDTAAS RWRRAGTKSA KIGNGLSKDG KAQKLAITHW LEAIDPHHRY GNNLNLYYDV WFSSGTSQPF FYWLDVGEGK EINIENCPRT VLQKQCIKYL
201: APKEREAYEV VIDDGKLVYR HSGVLLNTVE GSKWIFVLSP SRNMYVAEKK QGQFHHSSFL AGGATIAVGQ LVAHNGVLQA IRPYSGYYNP TEENFKELIS
301: FLEEHHADLT NVKVNP
101: NTEKPDTAAS RWRRAGTKSA KIGNGLSKDG KAQKLAITHW LEAIDPHHRY GNNLNLYYDV WFSSGTSQPF FYWLDVGEGK EINIENCPRT VLQKQCIKYL
201: APKEREAYEV VIDDGKLVYR HSGVLLNTVE GSKWIFVLSP SRNMYVAEKK QGQFHHSSFL AGGATIAVGQ LVAHNGVLQA IRPYSGYYNP TEENFKELIS
301: FLEEHHADLT NVKVNP
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.