CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	KRG89812	AT5G21274.1	21798944
AT5G57010.1	KRG94975	AT5G21274.1	21798944
AT5G57010.1	KRH18664	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44122	Soybean	nucleus	92.38	92.2
KRH23287	Soybean	cytosol	65.73	64.57
KRH10031	Soybean	cytosol	59.52	63.06
VIT_09s0002g04560.t01	Wine grape	cytosol	39.88	62.97
Zm00001d050807_P001	Maize	cytosol	16.63	58.04
GSMUA_Achr8P24930_001	Banana	cytosol	42.89	55.58
KRH19209	Soybean	cytosol	29.26	53.87
GSMUA_Achr8P26270_001	Banana	plastid	51.7	53.75
KRH12419	Soybean	cytosol, plastid	56.71	53.7
GSMUA_Achr4P09170_001	Banana	cytosol	51.7	53.09
KRH02687	Soybean	plastid	55.51	52.26
AT5G57010.1	Thale cress	cytosol	51.3	51.72
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	54.51	51.52
Bra002773.1-P	Field mustard	cytosol	51.7	50.89
GSMUA_Achr3P25890_001	Banana	mitochondrion	52.3	50.39
Zm00001d036000_P001	Maize	cytosol	14.23	50.35
GSMUA_Achr8P05470_001	Banana	plastid	50.1	50.1
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	53.11	49.44
Zm00001d009755_P001	Maize	plastid	41.88	46.86
Zm00001d042156_P001	Maize	mitochondrion	17.64	46.32
Bra035643.1-P	Field mustard	cytosol	51.3	45.39
TraesCS3B01G238500.1	Wheat	cytosol, plastid	47.7	43.99
TraesCS3D01G209200.2	Wheat	plastid	47.7	43.12
TraesCS3A01G206400.1	Wheat	plastid	47.9	42.99
Os01t0570800-01	Rice	plastid	48.9	42.88
HORVU3Hr1G049640.1	Barley	plastid	47.09	42.65
EES03151	Sorghum	mitochondrion, plastid	48.7	42.19
Zm00001d044253_P001	Maize	plastid	47.29	41.99
EES18807	Sorghum	plastid	45.89	39.83
KRG96176	Soybean	plastid	37.07	39.61
KRH30882	Soybean	cytosol	37.47	39.45
KRH71773	Soybean	nucleus	43.89	39.11
KRG97321	Soybean	nucleus	42.69	38.1
KRH32680	Soybean	cytosol	36.87	38.1
Zm00001d011228_P001	Maize	plastid	41.28	37.45
KRH38004	Soybean	cytosol	44.49	37.31
KRH58931	Soybean	nucleus	45.49	34.6
KRH42833	Soybean	cytosol	45.29	34.19
KRH67885	Soybean	cytosol	21.24	29.78
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	51.7	28.63
VIT_09s0002g01680.t01	Wine grape	plastid	57.52	28.47

Protein Annotations

EMBL:ACUP02004135	EnsemblPlants:KRH47098	EnsemblPlantsGene:GLYMA_07G008300	EntrezGene:100783559	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25
ProteinID:KRH47098	ProteinID:KRH47098.1	SEG:seg	UniParc:UPI00023C7CF9	UniProt:K7KYX2	MapMan:35.1

Description

hypothetical protein

Coordinates

chr7:+:604283..609562

Molecular Weight (calculated)

56438.6 Da

IEP (calculated)

9.639

GRAVY (calculated)

-0.483

Length

499 amino acids

Sequence
(BLAST)

001: MVTVEYESKE GEITFRTMSF KKCRTLYKPD HELDEVIITE KTTRSKRRKV GNLKLQTTFS FNYLLSNNSG NSEEVGGGLF NEHSSPTIEL PKPEILFSPK
101: SIGELDVAAI KLQKVYKSYR TRRNLADCAV VCEELWWKKA LDTVAVSRCS TSRFDYGKSE TALSRWARAR TMAAKVGKGL SKDDKAQKLA LRHWLEAIDP
201: RHRYGHNLHI YYAVWFHSQS SQPFFYWLDV GDGKEVNLDE CPRSELYRQC IKYLGPKERE AYEVIIEGGR LVYRKGQNLV HTVEGSKWIF VLSSSRILYV
301: GEKKKGHFQH SSFLAGGATI ASGRLVAQNG VLDAIWPYSG HYCPTKKHFM EFIGFLIEHN VDLTNVKKYA IDDDIPPTKP LDEELQFESQ MANNVGSSDF
401: ATAKNCTQDN MAHSGANMET SQLKESKPLS RKWTTGVGPR IGCVREYPAK LQVKALEQLN LSPRVNLAKI ASKAPIPSPR PSPKILLSPR LVHMGIPSP

Best Arabidopsis Sequence Match ( AT2G26190.3 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.