Factsheet for GSMUA_Achr8P24930_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr10P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr11P...	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr2P01120_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P09330_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr3P25040_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P07820_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr5P27590_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P15990_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr6P23670_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr8P05790_001	AT5G21274.1	21798944
AT5G57010.1	GSMUA_Achr9P17280_001	AT5G21274.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g121770.1.1	Tomato	cytosol	42.34	61.05
VIT_09s0002g04560.t01	Wine grape	cytosol	49.09	59.81
CDX75320	Canola	endoplasmic reticulum, extracellular	47.53	50.55
GSMUA_Achr4P09170_001	Banana	cytosol	63.64	50.41
Bra017264.1-P	Field mustard	endoplasmic reticulum, extracellular	41.82	47.35
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	65.71	47.2
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	37.14	46.73
GSMUA_Achr8P26270_001	Banana	plastid	58.18	46.67
CDX68935	Canola	plastid	56.36	46.27
Bra011409.1-P	Field mustard	plastid	56.1	45.76
CDX77035	Canola	plastid	56.62	45.51
GSMUA_Achr3P25890_001	Banana	mitochondrion	58.96	43.82
GSMUA_Achr8P05470_001	Banana	plastid	56.36	43.49
GSMUA_Achr3P03060_001	Banana	cytosol	42.86	43.19
KRH12419	Soybean	cytosol, plastid	58.96	43.07
GSMUA_Achr7P09200_001	Banana	cytosol, extracellular, nucleus, plastid	56.88	42.94
KRH47098	Soybean	nucleus	55.58	42.89
KRH02687	Soybean	plastid	58.96	42.83
VIT_11s0016g01970.t01	Wine grape	cytosol	59.22	42.62
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	58.44	42.61
CDY45026	Canola	cytosol	56.62	42.33
KRH44122	Soybean	nucleus	54.29	41.8
CDY35312	Canola	plastid	56.62	41.68
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	58.44	41.67
KRH10031	Soybean	cytosol	50.91	41.61
Bra034295.1-P	Field mustard	plastid	56.62	41.6
AT5G57010.1	Thale cress	cytosol	53.25	41.41
GSMUA_Achr6P05460_001	Banana	cytosol	58.18	41.18
GSMUA_Achr6P04920_001	Banana	endoplasmic reticulum, vacuole	54.81	40.81
GSMUA_Achr10P...	Banana	endoplasmic reticulum	54.55	40.62
AT2G26190.1	Thale cress	plastid	55.58	40.23
Bra002773.1-P	Field mustard	cytosol	52.47	39.84
GSMUA_Achr6P01520_001	Banana	cytosol	24.42	39.66
Bra034546.1-P	Field mustard	cytosol	56.62	39.64
CDY28281	Canola	cytosol, plastid	56.36	38.96
KRH23287	Soybean	cytosol	51.17	38.78
AT4G33050.5	Thale cress	plastid	55.84	38.39
KRH19209	Soybean	cytosol	26.75	38.01
GSMUA_Achr4P06580_001	Banana	cytosol	51.95	36.97
Bra035643.1-P	Field mustard	cytosol	54.03	36.88
GSMUA_Achr4P13570_001	Banana	cytosol	51.17	36.21
GSMUA_Achr9P21650_001	Banana	plastid, vacuole	51.43	34.86
GSMUA_Achr6P13300_001	Banana	cytosol	44.42	34.55
GSMUA_Achr6P01560_001	Banana	mitochondrion	23.9	34.46
GSMUA_Achr4P11190_001	Banana	cytosol	48.57	31.91
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	43.64	30.0
GSMUA_Achr3P29200_001	Banana	cytosol	49.09	29.53
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	63.12	26.97
VIT_09s0002g01680.t01	Wine grape	plastid	60.26	23.02
GSMUA_Achr6P01510_001	Banana	nucleus	10.91	20.29

Protein Annotations

EnsemblPlants:GSMUA_Achr8P24930_001	EnsemblPlants:GSMUA_Achr8T24930_001	EnsemblPlantsGene:GSMUA_Achr8G24930_001	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25	SEG:seg
UniParc:UPI000295F15D	UniProt:M0TTE6	MapMan:35.1	:	:	:

Description

calmodulin-binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G24930_001]

Coordinates

chr8:+:28914030..28916134

Molecular Weight (calculated)

43672.6 Da

IEP (calculated)

7.439

GRAVY (calculated)

-0.453

Length

385 amino acids

Sequence
(BLAST)

001: MTIEITRLQT MNESKNQAMN ETITVAVRDP KLARCLPGLS SPRPLSEPDA AAAKLQRIYK SLCGSRRNLA DCAVVVEELW WKALDFASLK HCSVSFFNVG
101: KPETAASRWA RARTRAAKVG KGLSKDEKAQ KLALQHWLEA IDPRHRYGHN LQYYYDVWFE SESSQPFLFW LDVGDGREIN LDKCPRSNLH DQCIRYLGPK
201: EREAYEVIVE DGRLVYRESG LRVSTAEGSK WIFVLSTSRV LYIGQKRKGN FQHSSFLAGG AATAAGRLVV AGGALKAIWP YSGHYLPTEE NFEEFIIFLR
301: DNNVDLSNVK RCSVDDDMYP SFRKNTEEME DVAKVPNAAQ EATGWDFDMQ GRVTMESDGG TQILDALTDN TSIDRRFCSF NYFFR

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.