Factsheet for Solyc03g121770.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	70.41	61.44
Zm00001d050807_P001	Maize	cytosol	28.09	52.45
Zm00001d036000_P001	Maize	cytosol	24.34	46.1
GSMUA_Achr8P24930_001	Banana	cytosol	61.05	42.34
Zm00001d042156_P001	Maize	mitochondrion	29.96	42.11
Solyc07g040710.2.1	Tomato	cytosol	62.92	36.05
Solyc12g008960.1.1	Tomato	nucleus	63.67	34.48
GSMUA_Achr8P26270_001	Banana	plastid	61.05	33.96
GSMUA_Achr4P09170_001	Banana	cytosol	61.8	33.95
GSMUA_Achr8P05470_001	Banana	plastid	62.17	33.27
Zm00001d009755_P001	Maize	plastid	55.06	32.96
GSMUA_Achr3P25890_001	Banana	mitochondrion	63.67	32.82
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	65.54	32.65
Solyc10g085610.1.1	Tomato	cytosol	51.69	31.72
Solyc10g083360.1.1	Tomato	cytosol	50.94	29.18
TraesCS3B01G238500.1	Wheat	cytosol, plastid	57.3	28.28
HORVU3Hr1G049640.1	Barley	plastid	57.3	27.77
TraesCS3D01G209200.2	Wheat	plastid	56.93	27.54
TraesCS3A01G206400.1	Wheat	plastid	56.93	27.34
Os01t0570800-01	Rice	plastid	58.05	27.24
Solyc01g044420.2.1	Tomato	nucleus	57.3	26.56
Zm00001d044253_P001	Maize	plastid	55.43	26.33
EES03151	Sorghum	mitochondrion, plastid	56.18	26.04
EES18807	Sorghum	plastid	55.06	25.57
Solyc08g062930.1.1	Tomato	cytosol	37.08	25.38
Solyc09g009770.2.1	Tomato	nucleus	48.69	24.76
Solyc01g005800.2.1	Tomato	nucleus	58.05	23.45
Solyc10g080640.1.1	Tomato	nucleus	55.43	23.38
Solyc10g078650.1.1	Tomato	nucleus	52.81	23.23
Zm00001d011228_P001	Maize	plastid	46.44	22.55
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	62.92	18.65

Protein Annotations

EnsemblPlants:Solyc03g121770.1.1	EnsemblPlantsGene:Solyc03g121770.1	PANTHER:PTHR31250	PANTHER:PTHR31250:SF25	SEG:seg	UniParc:UPI00027655B3
UniProt:K4BMX6	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3:-:69834438..69838248

Molecular Weight (calculated)

30355.9 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.425

Length

267 amino acids

Sequence
(BLAST)

001: MTNSTVILEE HLWKALDFAT LTQSSVSFFD VEKTETTVSR WVRAQIRASK IGKGLSKNEK AQKLAIKTWL EAIDPRHRYG VNLNRYHDVW CNSGSLQPFF
101: YWLDIGDGTE VVVEQCSRSD LQSQCIKYLG PKEREAYEVI VKNGKLIYKK NGVCVDTIEG TKWIFVLSTS RTLYVGQKQT HHFHHSSFLA GAASLSSGRL
201: VVSNGNLKAI WAYSGHYRPT EEHFEEIISF LQDHHVDLTN VKKFAIDNDV APDKLKISNE SKDDGTK

Best Arabidopsis Sequence Match ( AT2G26190.1 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKRCS
401: VNEEYSSFNS SGYEEEATKE EEAEKKPAET IVTEEQEEEK ERERPVFQLA KRLSCKWNSG VGPRIGCVRD YPMELQSQAF EQVSLSPRIS PGSTRFPSPY
501: GPIPSPRPSP RVRVSPRLAY MGIPSPRVQV NC

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.