Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g083360.1.1 | Tomato | cytosol | 68.51 | 63.95 |
| CDY13341 | Canola | cytosol | 23.91 | 57.46 |
| KRH30882 | Soybean | cytosol | 61.38 | 56.33 |
| KRG96176 | Soybean | plastid | 60.23 | 56.1 |
| CDY13342 | Canola | cytosol | 57.7 | 55.04 |
| Bra028537.1-P | Field mustard | cytosol | 57.47 | 54.82 |
| CDX67541 | Canola | cytosol | 57.47 | 54.82 |
| Solyc09g009770.2.1 | Tomato | nucleus | 65.98 | 54.67 |
| KRH32680 | Soybean | cytosol | 60.69 | 54.66 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 58.62 | 54.49 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 47.82 | 54.45 |
| Bra019642.1-P | Field mustard | cytosol | 56.55 | 53.95 |
| CDX95381 | Canola | cytosol | 56.55 | 53.95 |
| AT3G52870.1 | Thale cress | cytosol | 56.32 | 53.73 |
| CDX76252 | Canola | cytosol | 55.86 | 53.29 |
| Zm00001d004916_P001 | Maize | cytosol | 44.14 | 52.32 |
| EES09264 | Sorghum | cytosol | 54.71 | 52.31 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 54.94 | 51.84 |
| Solyc03g121770.1.1 | Tomato | cytosol | 31.72 | 51.69 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 56.32 | 51.26 |
| Os12t0149900-01 | Rice | cytosol | 55.4 | 50.52 |
| Zm00001d052525_P001 | Maize | cytosol | 54.25 | 50.43 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 56.09 | 50.41 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 55.86 | 50.31 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 57.24 | 50.3 |
| EES16640 | Sorghum | cytosol | 52.18 | 50.22 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 55.86 | 50.1 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 55.17 | 50.0 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 55.4 | 49.9 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 54.94 | 49.79 |
| Zm00001d035377_P001 | Maize | cytosol | 49.2 | 49.08 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 53.33 | 48.33 |
| EES09263 | Sorghum | cytosol | 49.89 | 47.8 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 52.18 | 47.59 |
| Os11t0151002-00 | Rice | cytosol | 51.49 | 47.26 |
| KRH67885 | Soybean | cytosol | 35.86 | 43.82 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 55.86 | 43.39 |
| Solyc07g040710.2.1 | Tomato | cytosol | 43.22 | 40.34 |
| Solyc12g008960.1.1 | Tomato | nucleus | 44.6 | 39.35 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 23.68 | 37.87 |
| Solyc01g044420.2.1 | Tomato | nucleus | 45.98 | 34.72 |
| Solyc01g005800.2.1 | Tomato | nucleus | 46.44 | 30.56 |
| Solyc10g078650.1.1 | Tomato | nucleus | 42.53 | 30.48 |
| Solyc08g062930.1.1 | Tomato | cytosol | 26.9 | 30.0 |
| Solyc10g080640.1.1 | Tomato | nucleus | 42.07 | 28.91 |
Protein Annotations
| EnsemblPlants:Solyc10g085610.1.1 | EnsemblPlantsGene:Solyc10g085610.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF10 | PFscan:PS50096 | UniParc:UPI000276AA2C | UniProt:K4D3Z5 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:64729553..64733442
Molecular Weight (calculated)
49390.3 Da
IEP (calculated)
8.972
GRAVY (calculated)
-0.538
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKTLYSLS TSDFTSHDEH HQFPFSDRRR PECDISISNA AMKVQKVYRS YRTRRMLADS AVVAEVLWWQ AIDYARLNHS TVSFFNFLKP ETVSSRWNRI
101: SLNASKVGKG LSKDAKAQKL AFQHWIEAID PRHRYGHNLH IYYEEWCKTE SGQPFFFWLD LGDGKKVDFE ECPRSKLQKQ IIKYLGPQER EHYEYIVAEG
201: KIVHEKTGNV LDTTKGLPGA KWIFVMSTSR RLYAGEKKKG LFHHSSFLAG GATSAAGRLV VMDGRVVSIS AYSGHYRPTE DRLDSFLSFL NENGVNLDEV
301: EIRKSNEDYE SYGDRKSIGS GYTSDFSALS DSPSLADFPK EEKPDVPLKS AQNLVAQTSS HNRSLSGSLQ IPIAEMSRTP ILRRIHSEKS PKSYQLPLVW
401: STGAGPRIGC FADFPAEIRW QALELTNLSP RPCSV
101: SLNASKVGKG LSKDAKAQKL AFQHWIEAID PRHRYGHNLH IYYEEWCKTE SGQPFFFWLD LGDGKKVDFE ECPRSKLQKQ IIKYLGPQER EHYEYIVAEG
201: KIVHEKTGNV LDTTKGLPGA KWIFVMSTSR RLYAGEKKKG LFHHSSFLAG GATSAAGRLV VMDGRVVSIS AYSGHYRPTE DRLDSFLSFL NENGVNLDEV
301: EIRKSNEDYE SYGDRKSIGS GYTSDFSALS DSPSLADFPK EEKPDVPLKS AQNLVAQTSS HNRSLSGSLQ IPIAEMSRTP ILRRIHSEKS PKSYQLPLVW
401: STGAGPRIGC FADFPAEIRW QALELTNLSP RPCSV
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.