Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g040710.2.1 | Tomato | cytosol | 75.66 | 80.04 |
| PGSC0003DMT400000881 | Potato | cytosol | 72.82 | 66.85 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 69.78 | 64.3 |
| Solyc03g121770.1.1 | Tomato | cytosol | 34.48 | 63.67 |
| Solyc08g062930.1.1 | Tomato | cytosol | 36.31 | 45.9 |
| Solyc10g085610.1.1 | Tomato | cytosol | 39.35 | 44.6 |
| Solyc10g083360.1.1 | Tomato | cytosol | 40.16 | 42.49 |
| Solyc01g044420.2.1 | Tomato | nucleus | 48.88 | 41.84 |
| Solyc10g078650.1.1 | Tomato | nucleus | 46.25 | 37.56 |
| Solyc09g009770.2.1 | Tomato | nucleus | 39.96 | 37.52 |
| Solyc10g080640.1.1 | Tomato | nucleus | 47.67 | 37.12 |
| Solyc01g005800.2.1 | Tomato | nucleus | 49.29 | 36.76 |
Protein Annotations
| EnsemblPlants:Solyc12g008960.1.1 | EnsemblPlantsGene:Solyc12g008960.1 | ncoils:Coil | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF25 | SEG:seg |
| UniParc:UPI00027696DE | UniProt:K4DBY4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr12:+:2266946..2269413
Molecular Weight (calculated)
56463.8 Da
IEP (calculated)
9.706
GRAVY (calculated)
-0.677
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVRSNSFKG THLETIIQSN NEVDKMTRKN SINLRNCDPK KLMLETTLSF KNLVQDLDIS EWNEKKTRAT VSLPEPSILF SPRPVSELDA AAVKLQKVYK
101: SYRTRRNLAD CAVVVEELWW KALDFAALKR SSVSFFNVEK PETAVSRWAR ARTRAAKVGK GLSKDEKAQK LALQHWLEAI DPRHRYGHNL HFYYDIWFES
201: ESSQPFFYWL DVGDGKEINL EKCPRFNLQH QCIKYLGPKE RESYEVVIQD GKLVYKQNGV FVETVEGSKW IFVLSTTRTL YVGKKKKGVF QHSSFLSGGA
301: TTAAGRLVAH GGVLKAIWPY SGHYHPTEEN FREFISFLEE HSVDLTNVKR CSVDDDDHSF RVNNEGSNHQ SLITKESPKR STEEKTEEKR EVNTTDDERE
401: DKKQEDTSFS FAKRLSRKWS TGNGPRIGCV REYPTELQFR ALEQVNLSPR VANGGFNMYG PIPSPRPSPK IRLSPRIAYM GLPSPRTPIS AAN
101: SYRTRRNLAD CAVVVEELWW KALDFAALKR SSVSFFNVEK PETAVSRWAR ARTRAAKVGK GLSKDEKAQK LALQHWLEAI DPRHRYGHNL HFYYDIWFES
201: ESSQPFFYWL DVGDGKEINL EKCPRFNLQH QCIKYLGPKE RESYEVVIQD GKLVYKQNGV FVETVEGSKW IFVLSTTRTL YVGKKKKGVF QHSSFLSGGA
301: TTAAGRLVAH GGVLKAIWPY SGHYHPTEEN FREFISFLEE HSVDLTNVKR CSVDDDDHSF RVNNEGSNHQ SLITKESPKR STEEKTEEKR EVNTTDDERE
401: DKKQEDTSFS FAKRLSRKWS TGNGPRIGCV REYPTELQFR ALEQVNLSPR VANGGFNMYG PIPSPRPSPK IRLSPRIAYM GLPSPRTPIS AAN
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.