Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400082749 | Potato | cytosol | 95.92 | 95.92 |
| Solyc12g008960.1.1 | Tomato | nucleus | 80.04 | 75.66 |
| Solyc03g121770.1.1 | Tomato | cytosol | 36.05 | 62.92 |
| VIT_11s0016g01970.t01 | Wine grape | cytosol | 70.17 | 61.12 |
| Solyc08g062930.1.1 | Tomato | cytosol | 37.12 | 44.36 |
| Solyc10g085610.1.1 | Tomato | cytosol | 40.34 | 43.22 |
| Solyc10g083360.1.1 | Tomato | cytosol | 41.2 | 41.2 |
| Solyc01g044420.2.1 | Tomato | nucleus | 48.5 | 39.24 |
| Solyc09g009770.2.1 | Tomato | nucleus | 40.99 | 36.38 |
| Solyc10g078650.1.1 | Tomato | nucleus | 46.57 | 35.75 |
| Solyc10g080640.1.1 | Tomato | nucleus | 48.5 | 35.7 |
| Solyc01g005800.2.1 | Tomato | nucleus | 49.14 | 34.64 |
Protein Annotations
| EnsemblPlants:Solyc07g040710.2.1 | EnsemblPlantsGene:Solyc07g040710.2 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF25 | SEG:seg | UniParc:UPI000276B620 |
| UniProt:K4CDU8 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:49418152..49420422
Molecular Weight (calculated)
52544.6 Da
IEP (calculated)
9.697
GRAVY (calculated)
-0.464
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MTVIRTNSFK GTESETITKP KKNSINVTNC EPLKLMLHTT LSFKNLVQVQ DSVVALPEPA LMFSPRPVCE LDAAAVKLQK VYKSYRTRRN LADCAVVVEE
101: LWWKALDFAA LKRSSVSFFN VEKPETAVSR WARARTRAAK VGKGLSKDEK AQKLALQHWL EAIDPRHRYG HNLHFYYDLW FLSESSQPFF YWLDVGDGKE
201: INLEKCPRTK LHHQCIKYLG PKERESYEVV IENGKLVYKQ SGVSVKSVEG SKSIFVLSTT RTLYVGQKQK GTFQHSSFLS GGAITAAGRL VAHSGILEAI
301: WPYSGHYHPT EENFKEFISF LEEHKVDLTN VKRCAVDDDN LSEASNSQPS VDLSIAKESE ERNTSESKKP EDVIINKKAQ TFSFSKHLSS KWTSGTGPRI
401: GCVRDYPTEL QFRALEQVNL SPRVVNGDFN FSSPIPSPRP SPNIRLSPRI AHMGLPSPRT PISVPN
101: LWWKALDFAA LKRSSVSFFN VEKPETAVSR WARARTRAAK VGKGLSKDEK AQKLALQHWL EAIDPRHRYG HNLHFYYDLW FLSESSQPFF YWLDVGDGKE
201: INLEKCPRTK LHHQCIKYLG PKERESYEVV IENGKLVYKQ SGVSVKSVEG SKSIFVLSTT RTLYVGQKQK GTFQHSSFLS GGAITAAGRL VAHSGILEAI
301: WPYSGHYHPT EENFKEFISF LEEHKVDLTN VKRCAVDDDN LSEASNSQPS VDLSIAKESE ERNTSESKKP EDVIINKKAQ TFSFSKHLSS KWTSGTGPRI
401: GCVRDYPTEL QFRALEQVNL SPRVVNGDFN FSSPIPSPRP SPNIRLSPRI AHMGLPSPRT PISVPN
001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC
Arabidopsis Description
EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.