Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G128200.1 | Wheat | cytosol | 98.12 | 98.12 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 95.21 | 94.62 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 89.79 | 93.49 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 91.04 | 90.29 |
| Os12t0149900-01 | Rice | cytosol | 80.0 | 80.5 |
| EES09264 | Sorghum | cytosol | 75.62 | 79.78 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 79.17 | 79.17 |
| EES16640 | Sorghum | cytosol | 73.96 | 78.54 |
| Zm00001d052525_P001 | Maize | cytosol | 73.96 | 75.85 |
| Zm00001d004916_P001 | Maize | cytosol | 57.92 | 75.75 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 46.88 | 58.9 |
| CDY13341 | Canola | cytosol | 21.67 | 57.46 |
| CDX67541 | Canola | cytosol | 54.38 | 57.24 |
| CDY13342 | Canola | cytosol | 54.38 | 57.24 |
| Bra028537.1-P | Field mustard | cytosol | 54.17 | 57.02 |
| AT3G52870.1 | Thale cress | cytosol | 53.54 | 56.36 |
| CDX95381 | Canola | cytosol | 53.54 | 56.36 |
| Bra019642.1-P | Field mustard | cytosol | 53.33 | 56.14 |
| CDX76252 | Canola | cytosol | 53.33 | 56.14 |
| KRH30882 | Soybean | cytosol | 55.42 | 56.12 |
| KRG96176 | Soybean | plastid | 54.58 | 56.1 |
| Solyc10g085610.1.1 | Tomato | cytosol | 50.0 | 55.17 |
| VIT_13s0074g00760.t01 | Wine grape | nucleus | 51.25 | 55.03 |
| PGSC0003DMT400072375 | Potato | cytosol | 53.33 | 54.94 |
| Solyc10g083360.1.1 | Tomato | cytosol | 53.12 | 54.72 |
| KRH32680 | Soybean | cytosol | 55.0 | 54.66 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 55.21 | 53.54 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 49.58 | 50.85 |
| PGSC0003DMT400022916 | Potato | cytosol | 53.96 | 49.81 |
| Solyc09g009770.2.1 | Tomato | nucleus | 53.96 | 49.33 |
| KRH67885 | Soybean | cytosol | 34.17 | 46.07 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 53.54 | 45.89 |
| TraesCS2D01G160200.1 | Wheat | cytosol | 44.79 | 37.65 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 41.88 | 36.09 |
| TraesCS3D01G209200.2 | Wheat | plastid | 40.0 | 34.78 |
| TraesCS1D01G128400.2 | Wheat | nucleus | 40.0 | 34.47 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 43.75 | 34.26 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G137100.1 | EnsemblPlantsGene:TraesCS5D01G137100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF10 | PFscan:PS50096 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr5D:+:218051810..218055445
Molecular Weight (calculated)
53126.5 Da
IEP (calculated)
6.724
GRAVY (calculated)
-0.548
Length
480 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVETAMPPP AAGLNSAVRE PNDTEASSPS PAAGGGANGA ATKVQKVYRS YRTRRKLADS AVVVEELWWQ ALDFARLNHS TVSFYDDPEP ETAASRWNRV
101: SLNASKVGQG LSKDAKALKL AFQHWIEAID PRHRYGHNLH FYYDAWCQTQ AGQPFFYWLD IGEGKDVELP ECSRALLKKQ CIRYLGPQER EYYEYIIEDG
201: KIINKISGES LDTSQGPKGT KWIFVMSTAK KLYAGQKERG VFQHSSFLAG GATIAAGRFT AENGVIKSIW AYSGHYKPSA ENLTNFMSFL EENGVDLKEV
301: EVRSSTKEDY YEDPVPNIKE NPAAAAMMAS NTPQLILPSN MVEEDKASGP SSQTEADEDD NVRVEQARPT YQRTLSGGLQ SPRDAVVSQD AILERVNSKS
401: KSKSYQLGHR LSLKWSTGNG PRIGCVKDYP IELRMQALEM VQLSPRASTP PASWRVPSCL SPTLPMPPLV PLQASLPQPS
101: SLNASKVGQG LSKDAKALKL AFQHWIEAID PRHRYGHNLH FYYDAWCQTQ AGQPFFYWLD IGEGKDVELP ECSRALLKKQ CIRYLGPQER EYYEYIIEDG
201: KIINKISGES LDTSQGPKGT KWIFVMSTAK KLYAGQKERG VFQHSSFLAG GATIAAGRFT AENGVIKSIW AYSGHYKPSA ENLTNFMSFL EENGVDLKEV
301: EVRSSTKEDY YEDPVPNIKE NPAAAAMMAS NTPQLILPSN MVEEDKASGP SSQTEADEDD NVRVEQARPT YQRTLSGGLQ SPRDAVVSQD AILERVNSKS
401: KSKSYQLGHR LSLKWSTGNG PRIGCVKDYP IELRMQALEM VQLSPRASTP PASWRVPSCL SPTLPMPPLV PLQASLPQPS
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.