Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G154900.1 | Wheat | cytosol | 95.97 | 97.16 |
| TraesCS2B01G180000.1 | Wheat | cytosol | 94.92 | 94.76 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 91.24 | 91.89 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 90.37 | 87.31 |
| Os07t0633400-01 | Rice | cytosol | 75.13 | 73.33 |
| EER97603 | Sorghum | nucleus | 73.38 | 66.19 |
| Zm00001d022245_P001 | Maize | cytosol | 73.2 | 63.24 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 57.27 | 58.71 |
| Bra021491.1-P | Field mustard | nucleus | 47.64 | 55.17 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 47.81 | 51.22 |
| Bra027414.1-P | Field mustard | nucleus | 51.31 | 50.87 |
| AT3G13600.1 | Thale cress | nucleus | 51.84 | 48.93 |
| Bra001512.1-P | Field mustard | cytosol | 44.66 | 48.2 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 51.66 | 48.12 |
| KRG97321 | Soybean | nucleus | 45.88 | 46.87 |
| KRH71773 | Soybean | nucleus | 45.53 | 46.43 |
| Solyc01g044420.2.1 | Tomato | nucleus | 46.58 | 46.18 |
| Bra014570.1-P | Field mustard | nucleus | 45.36 | 46.0 |
| PGSC0003DMT400080788 | Potato | nucleus | 43.61 | 45.69 |
| AT3G58480.1 | Thale cress | nucleus | 45.71 | 45.39 |
| KRH58931 | Soybean | nucleus | 52.01 | 45.27 |
| KRH42833 | Soybean | cytosol | 52.01 | 44.93 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 37.65 | 44.79 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 52.01 | 44.33 |
| KRH38004 | Soybean | cytosol | 45.71 | 43.87 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 37.13 | 43.8 |
| Solyc10g080640.1.1 | Tomato | nucleus | 47.81 | 43.13 |
| TraesCS1D01G128400.2 | Wheat | nucleus | 41.51 | 42.55 |
| Solyc10g078650.1.1 | Tomato | nucleus | 45.01 | 42.34 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 34.68 | 41.25 |
| PGSC0003DMT400021529 | Potato | cytosol | 45.88 | 40.94 |
| Solyc01g005800.2.1 | Tomato | nucleus | 47.11 | 40.7 |
| TraesCS3D01G209200.2 | Wheat | plastid | 39.05 | 40.4 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 43.61 | 35.52 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G160200.1 | EnsemblPlantsGene:TraesCS2D01G160200 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF16 | SEG:seg | MapMan:35.1 |
Description
No Description!
Coordinates
chr2D:+:103126889..103129591
Molecular Weight (calculated)
64335.0 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.592
Length
571 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLFSCPVE DDGECGLVAA AAAAEEQQQA TFLKASLGSG KLRIEGSLSF KRLQLVEPKI PVATPDAVTA PVPVPVPMPR ELLRTRFADA AVAASAAPPE
101: SPKHEAAAVT LQKVYKSFRT RRRLADCAVL VEQNWWELLD FALLKRSSVS FFDIERQETA VSKWARARTR AAKVGKGLSK DEKARKLALQ HWLEAIDPRH
201: RYGHNLHYYY DCWLRCESRE PFFYWLDIGE GKEINLEERC PRSKLLSQCI KYLGPKEREE YEVVIEDGKF MYKNSRQILD TSGGPRDAKW IFVLSTSRNL
301: YVGQKKKGTF QHSSFLAGGA ASAAGRLVVE DGVLKAIWPH SGHYRPTEEN FQEFQDFLRE NKVDLTDVKM SPTEEDEEFW SRLRSIPSER CTDADKPEEE
401: MVPAAETIPC QAPQVTETTP ENVIQLQETN KDHSQPEIFT RLDSSKGAVN IENSTTSMPE DHEEDSDDDH SVVPREKVIG RVNSYQLGKQ GSFKWTTGAG
501: PRIICVRDYP PELQHRALEE VHLSPRRSGR PTSRFSSPQR GGSPMSRGCE PLTPREAFHA THLQQGLLIS L
101: SPKHEAAAVT LQKVYKSFRT RRRLADCAVL VEQNWWELLD FALLKRSSVS FFDIERQETA VSKWARARTR AAKVGKGLSK DEKARKLALQ HWLEAIDPRH
201: RYGHNLHYYY DCWLRCESRE PFFYWLDIGE GKEINLEERC PRSKLLSQCI KYLGPKEREE YEVVIEDGKF MYKNSRQILD TSGGPRDAKW IFVLSTSRNL
301: YVGQKKKGTF QHSSFLAGGA ASAAGRLVVE DGVLKAIWPH SGHYRPTEEN FQEFQDFLRE NKVDLTDVKM SPTEEDEEFW SRLRSIPSER CTDADKPEEE
401: MVPAAETIPC QAPQVTETTP ENVIQLQETN KDHSQPEIFT RLDSSKGAVN IENSTTSMPE DHEEDSDDDH SVVPREKVIG RVNSYQLGKQ GSFKWTTGAG
501: PRIICVRDYP PELQHRALEE VHLSPRRSGR PTSRFSSPQR GGSPMSRGCE PLTPREAFHA THLQQGLLIS L
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.