Factsheet for TraesCS6D01G097300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G137500.1	Wheat	cytosol	95.66	95.86
TraesCS6A01G108900.1	Wheat	cytosol	95.87	95.67
HORVU6Hr1G019510.4	Barley	cytosol	93.39	94.56
TraesCS5D01G137100.1	Wheat	cytosol	90.29	91.04
Os12t0149900-01	Rice	cytosol	79.96	81.13
EES09264	Sorghum	cytosol	75.21	80.0
EES16640	Sorghum	cytosol	73.35	78.54
TraesCS6D01G093400.1	Wheat	cytosol	77.27	77.92
Zm00001d004916_P001	Maize	cytosol	58.68	77.38
Zm00001d052525_P001	Maize	cytosol	73.55	76.07
GSMUA_Achr3P03060_001	Banana	cytosol	46.69	59.16
CDY13341	Canola	cytosol	21.69	58.01
CDY13342	Canola	cytosol	54.55	57.89
CDX67541	Canola	cytosol	54.55	57.89
Bra028537.1-P	Field mustard	cytosol	54.34	57.68
KRH30882	Soybean	cytosol	55.58	56.75
AT3G52870.1	Thale cress	cytosol	53.31	56.58
CDX95381	Canola	cytosol	53.1	56.36
Bra019642.1-P	Field mustard	cytosol	52.89	56.14
CDX76252	Canola	cytosol	52.89	56.14
Solyc10g085610.1.1	Tomato	cytosol	50.41	56.09
VIT_13s0074g00760.t01	Wine grape	nucleus	51.65	55.93
KRG96176	Soybean	plastid	53.51	55.46
PGSC0003DMT400072375	Potato	cytosol	53.1	55.15
Solyc10g083360.1.1	Tomato	cytosol	52.89	54.94
KRH32680	Soybean	cytosol	54.75	54.87
GSMUA_Achr6P13300_001	Banana	cytosol	55.17	53.94
VIT_08s0007g03630.t01	Wine grape	cytosol	49.59	51.28
PGSC0003DMT400022916	Potato	cytosol	53.51	49.81
Solyc09g009770.2.1	Tomato	nucleus	53.51	49.33
KRH67885	Soybean	cytosol	34.3	46.63
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	53.1	45.89
TraesCS2D01G160200.1	Wheat	cytosol	43.8	37.13
TraesCS3D01G209200.2	Wheat	plastid	40.29	35.33
TraesCS5D01G385200.2	Wheat	cytosol	40.5	35.19
TraesCS1D01G128400.2	Wheat	nucleus	40.08	34.83
TraesCS4D01G281600.1	Wheat	nucleus	43.59	34.42

Protein Annotations

EnsemblPlants:TraesCS6D01G097300.1	EnsemblPlantsGene:TraesCS6D01G097300	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr6D:+:61134698..61138270

Molecular Weight (calculated)

53427.8 Da

IEP (calculated)

8.109

GRAVY (calculated)

-0.576

Length

484 amino acids

Sequence
(BLAST)

001: MEVETAVPPP AAGPDRVETA SREPSHTGAS SSPSPAAGGE ANGAATKVQK VYRSYRTRRK LADSAVVVEE LWWQALDFAR LNHSTVSFYD DPEPETAASR
101: WNRVSLNASK VGQGLSKDAK ALKLAFQHWI EAIDPRHRYG HNLHFYYDVW CQTQAGQPFF YWLDIGEGKD VDLPDCPRAR LKKQCIRYLG PQEREFYEYI
201: VKEGKIIHKI SGEALDTSQG PKGTKWIFVM STAKKLYAGQ KERGVFQHSS FLAGGATIAA GRFTAENGVI KSIWAYSGHY KPSAENLSNF MSFLEENGVD
301: LKEVEVRSST KEDYYEDPAP NSKQNPAAAI MPSNPPQLIL PSNMVEEAKA SGQSSQTEAD EVNDNLCVEK ARPAYQRTLS GGLQSPRDAV VSQDAILERV
401: NSKNKSKSYQ LGDRLSLKWS TGNGPRIGCV KDYPIELRMQ ALEMVQLSPR ASTPPASWRV PSCISPTSPT SPLVPMQASL PQPS

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.