Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13342 | Canola | cytosol | 87.06 | 87.06 |
| Bra028537.1-P | Field mustard | cytosol | 87.06 | 87.06 |
| CDX67541 | Canola | cytosol | 86.84 | 86.84 |
| CDY13341 | Canola | cytosol | 33.99 | 85.64 |
| CDX95381 | Canola | cytosol | 84.21 | 84.21 |
| CDX76252 | Canola | cytosol | 83.99 | 83.99 |
| Bra019642.1-P | Field mustard | cytosol | 83.77 | 83.77 |
| KRG96176 | Soybean | plastid | 60.31 | 58.89 |
| PGSC0003DMT400072375 | Potato | cytosol | 59.43 | 58.15 |
| Solyc10g083360.1.1 | Tomato | cytosol | 59.43 | 58.15 |
| EES09264 | Sorghum | cytosol | 57.24 | 57.36 |
| KRH30882 | Soybean | cytosol | 59.21 | 56.96 |
| KRH32680 | Soybean | cytosol | 60.09 | 56.73 |
| Solyc10g085610.1.1 | Tomato | cytosol | 53.73 | 56.32 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 47.15 | 56.28 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 57.68 | 56.2 |
| EES16640 | Sorghum | cytosol | 55.26 | 55.75 |
| Zm00001d052525_P001 | Maize | cytosol | 57.02 | 55.56 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 55.92 | 55.31 |
| Zm00001d004916_P001 | Maize | cytosol | 44.52 | 55.31 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 57.02 | 54.39 |
| Os12t0149900-01 | Rice | cytosol | 56.14 | 53.67 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 57.02 | 53.61 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 56.36 | 53.54 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 56.36 | 53.54 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 56.58 | 53.42 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 56.58 | 53.31 |
| Zm00001d035377_P001 | Maize | cytosol | 50.88 | 53.21 |
| EES09263 | Sorghum | cytosol | 52.85 | 53.08 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 56.14 | 53.0 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 55.7 | 52.92 |
| PGSC0003DMT400022916 | Potato | cytosol | 60.09 | 52.69 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 55.04 | 52.62 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 57.02 | 52.53 |
| Os11t0151002-00 | Rice | cytosol | 54.39 | 52.32 |
| Solyc09g009770.2.1 | Tomato | nucleus | 60.09 | 52.19 |
| KRH67885 | Soybean | cytosol | 36.18 | 46.35 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 27.63 | 46.32 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 54.82 | 44.64 |
| AT5G57010.1 | Thale cress | cytosol | 39.69 | 36.57 |
| AT2G26190.1 | Thale cress | plastid | 40.79 | 34.96 |
| AT3G58480.1 | Thale cress | nucleus | 43.64 | 34.61 |
| AT3G13600.1 | Thale cress | nucleus | 45.18 | 34.05 |
| AT4G33050.5 | Thale cress | plastid | 39.91 | 32.5 |
Protein Annotations
| MapMan:35.1 | EntrezGene:824453 | UniProt:A0A178V964 | ProteinID:AEE79002.1 | ArrayExpress:AT3G52870 | EnsemblPlantsGene:AT3G52870 |
| RefSeq:AT3G52870 | TAIR:AT3G52870 | RefSeq:AT3G52870-TAIR-G | EnsemblPlants:AT3G52870.1 | TAIR:AT3G52870.1 | EMBL:AY125521 |
| Unigene:At.35252 | EMBL:BT001053 | ProteinID:CAB86891.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0008150 |
| InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | RefSeq:NP_190855.1 | ProteinID:OAP02739.1 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50096 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF23 |
| UniProt:Q9LFA4 | UniParc:UPI00000AC4C4 | : | : | : | : |
Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
Coordinates
chr3:-:19593073..19595834
Molecular Weight (calculated)
51157.2 Da
IEP (calculated)
8.785
GRAVY (calculated)
-0.554
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.