Factsheet for TraesCS6B01G133900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G104600.1	Wheat	nucleus	53.46	93.75
TraesCS6D01G093400.1	Wheat	cytosol	93.71	93.12
TraesCS5B01G128200.1	Wheat	cytosol	80.29	79.79
TraesCS6B01G137500.1	Wheat	cytosol	78.83	77.85
Os12t0149900-01	Rice	cytosol	72.54	72.54
EES09264	Sorghum	cytosol	68.97	72.31
EES16640	Sorghum	cytosol	67.71	71.46
Zm00001d004916_P001	Maize	cytosol	54.93	71.39
Zm00001d052525_P001	Maize	cytosol	68.55	69.87
CDY13342	Canola	cytosol	53.25	55.7
CDX67541	Canola	cytosol	53.25	55.7
Bra028537.1-P	Field mustard	cytosol	53.04	55.48
AT3G52870.1	Thale cress	cytosol	52.62	55.04
GSMUA_Achr3P03060_001	Banana	cytosol	44.03	54.97
KRH30882	Soybean	cytosol	53.04	53.38
CDX95381	Canola	cytosol	50.94	53.29
Bra019642.1-P	Field mustard	cytosol	50.73	53.07
CDX76252	Canola	cytosol	50.73	53.07
VIT_13s0074g00760.t01	Wine grape	nucleus	49.69	53.02
CDY13341	Canola	cytosol	19.92	52.49
Solyc10g085610.1.1	Tomato	cytosol	47.59	52.18
KRH32680	Soybean	cytosol	52.83	52.17
KRG96176	Soybean	plastid	50.94	52.03
PGSC0003DMT400072375	Potato	cytosol	50.73	51.93
Solyc10g083360.1.1	Tomato	cytosol	50.52	51.72
VIT_08s0007g03630.t01	Wine grape	cytosol	48.22	49.15
GSMUA_Achr6P13300_001	Banana	cytosol	50.94	49.09
PGSC0003DMT400022916	Potato	cytosol	50.31	46.15
Solyc09g009770.2.1	Tomato	nucleus	49.9	45.33
KRH67885	Soybean	cytosol	31.87	42.7
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	49.9	42.5
TraesCS5B01G377900.1	Wheat	cytosol	42.77	37.92
TraesCS2B01G180000.1	Wheat	cytosol	41.51	34.62
TraesCS3B01G238500.1	Wheat	cytosol, plastid	38.16	33.64
TraesCS1B01G143800.1	Wheat	cytosol	38.57	31.72
TraesCS4B01G282600.2	Wheat	nucleus	41.72	29.75
TraesCS2B01G401000.1	Wheat	plastid	17.4	23.92

Protein Annotations

EnsemblPlants:TraesCS6B01G133900.1	EnsemblPlantsGene:TraesCS6B01G133900	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr6B:+:130822741..130829758

Molecular Weight (calculated)

52650.0 Da

IEP (calculated)

6.901

GRAVY (calculated)

-0.482

Length

477 amino acids

Sequence
(BLAST)

001: MEVETAMPPP ATELEHMDSA VLELAHTELS SLPGSDANGA ATKVQKVYRS YRTRRNLADS AVVVEELWWQ ALEFARLNHN TVSFYDGPEP ETAASRWRRV
101: SVNASKVGQG LSRDGKALKL AFQHWIEAID PRHRRGHNLY FYYDVWCQTQ AGQPFFYWLD IGEGKDVDLP ECPRALLKKQ CIRYLGPQER EYYEYIITEG
201: KITHKMSGEP LDTSQGPKGT KWIFVMSTAK KLYAGKKERG VFQHSSFLAG GATIAAGRFI AENAVIKSIW AYSGHYKPSA ENLSNFLSFL EENGVDLKEV
301: EVCSFTKEDC YEDPVPNTKQ NPAAATMSSN PSQLILPSNK ASGASSQTEA DEGNNPRVEQ ARATYQTTLS GGLQCPGDAG VSQEAILERV NSMSKSKSYQ
401: LGHRLSLKWS TGNGPRIGCV KDYPMELRIQ ALEMVQQSTT LTKGIDSSGL VDGTDRPLAH LANVAARASA DLPALAK

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.