Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G154900.1 | Wheat | cytosol | 94.76 | 96.1 |
| TraesCS2D01G160200.1 | Wheat | cytosol | 94.76 | 94.92 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 91.08 | 91.89 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 90.21 | 87.31 |
| Os07t0633400-01 | Rice | cytosol | 75.0 | 73.33 |
| TraesCS5B01G377900.1 | Wheat | cytosol | 62.24 | 66.17 |
| EER97603 | Sorghum | nucleus | 72.73 | 65.72 |
| Zm00001d022245_P001 | Maize | cytosol | 72.9 | 63.09 |
| Bra021491.1-P | Field mustard | nucleus | 47.2 | 54.77 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 47.38 | 50.84 |
| Bra027414.1-P | Field mustard | nucleus | 50.87 | 50.52 |
| AT3G13600.1 | Thale cress | nucleus | 51.57 | 48.76 |
| Bra001512.1-P | Field mustard | cytosol | 44.41 | 48.02 |
| KRG97321 | Soybean | nucleus | 45.98 | 47.05 |
| KRH71773 | Soybean | nucleus | 45.8 | 46.79 |
| Solyc01g044420.2.1 | Tomato | nucleus | 47.03 | 46.7 |
| PGSC0003DMT400080788 | Potato | nucleus | 43.88 | 46.05 |
| KRH58931 | Soybean | nucleus | 52.62 | 45.88 |
| Bra014570.1-P | Field mustard | nucleus | 45.1 | 45.83 |
| AT3G58480.1 | Thale cress | nucleus | 45.63 | 45.39 |
| KRH42833 | Soybean | cytosol | 52.27 | 45.23 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 51.92 | 44.33 |
| KRH38004 | Soybean | cytosol | 45.98 | 44.2 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 37.06 | 44.17 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 51.05 | 43.65 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 36.71 | 43.48 |
| Solyc10g080640.1.1 | Tomato | nucleus | 47.73 | 43.13 |
| Solyc10g078650.1.1 | Tomato | nucleus | 44.58 | 42.01 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 34.62 | 41.51 |
| TraesCS3B01G238500.1 | Wheat | cytosol, plastid | 38.99 | 41.22 |
| TraesCS1B01G143800.1 | Wheat | cytosol | 41.43 | 40.86 |
| Solyc01g005800.2.1 | Tomato | nucleus | 47.03 | 40.7 |
| PGSC0003DMT400021529 | Potato | cytosol | 45.45 | 40.62 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 43.71 | 35.66 |
| TraesCS2B01G401000.1 | Wheat | plastid | 19.23 | 31.7 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G180000.1 | EnsemblPlantsGene:TraesCS2B01G180000 | ncoils:Coil | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF16 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:+:154592475..154594845
Molecular Weight (calculated)
64354.9 Da
IEP (calculated)
6.789
GRAVY (calculated)
-0.597
Length
572 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVLFSCPVE DDGECGLVAA SAAAAEEQQA TFLKASLGSG KLRIEGSLSF KRLQLVEPNI SITSDSPRPD AVAVTAPVPV PRELLRTRFA DAAVTAAAQP
101: ESPKHEAAAV TLQKVYKSFR TRRRLADCAV LVEQNWWELL DFALLKRSSV SFFDIERQET AVSKWARART RAAKVGKGLS KDDKARKLAL QHWLEAIDPR
201: HRYGHNLHYY YDCWLRCESR EPFFYWLDIG EGKEINLEER CPRSKLLSQC IKYLGPKERE DYEVVIEDGK FMYKNSRQIL DTSGGPRDAK WIFVLSTSRN
301: LYVGQKKKGT FQHSSFLAGG AASAAGRLVV EDGVLKAIWP HSGHYRPTEE NFQEFQDFLR ENKVDLSDVK MSPTEEDEEF WSRLRSIPSE RCTDADKPEE
401: EMVPAAETIP CLAPQVTEAT PENVIQLQET SKDHSQPEIL TRLDSSKGAV NIEKSTNSMP EDHQEDSDDD HSSVPREKII GRVNSYQLGK QGSFKWTTGA
501: GPRIICVRDY PPELQHRALE EVHLSPRRSG RPTSRFSSPQ RGGSPMSRGC EPLTPREAFH ATHLQQGLLI SL
101: ESPKHEAAAV TLQKVYKSFR TRRRLADCAV LVEQNWWELL DFALLKRSSV SFFDIERQET AVSKWARART RAAKVGKGLS KDDKARKLAL QHWLEAIDPR
201: HRYGHNLHYY YDCWLRCESR EPFFYWLDIG EGKEINLEER CPRSKLLSQC IKYLGPKERE DYEVVIEDGK FMYKNSRQIL DTSGGPRDAK WIFVLSTSRN
301: LYVGQKKKGT FQHSSFLAGG AASAAGRLVV EDGVLKAIWP HSGHYRPTEE NFQEFQDFLR ENKVDLSDVK MSPTEEDEEF WSRLRSIPSE RCTDADKPEE
401: EMVPAAETIP CLAPQVTEAT PENVIQLQET SKDHSQPEIL TRLDSSKGAV NIEKSTNSMP EDHQEDSDDD HSSVPREKII GRVNSYQLGK QGSFKWTTGA
501: GPRIICVRDY PPELQHRALE EVHLSPRRSG RPTSRFSSPQ RGGSPMSRGC EPLTPREAFH ATHLQQGLLI SL
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.