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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97500 Canola nucleus 98.44 98.44
CDY23623 Canola nucleus 94.79 95.12
Bra021491.1-P Field mustard nucleus 76.04 88.84
AT3G13600.1 Thale cress nucleus 89.06 84.79
Bra001512.1-P Field mustard cytosol 77.43 84.31
Solyc01g044420.2.1 Tomato nucleus 58.68 58.68
PGSC0003DMT400080788 Potato nucleus 55.03 58.17
KRH58931 Soybean nucleus 65.28 57.32
GSMUA_Achr6P01520_001 Banana cytosol 23.44 56.96
KRH42833 Soybean cytosol 64.93 56.58
HORVU2Hr1G015200.2 Barley cytosol 38.89 56.0
GSMUA_Achr4P06580_001 Banana cytosol 52.43 55.82
KRG97321 Soybean nucleus 54.17 55.81
GSMUA_Achr4P13570_001 Banana cytosol 52.26 55.33
HORVU1Hr1G045060.3 Barley nucleus 35.42 55.28
TraesCS5A01G375700.1 Wheat cytosol 50.52 54.49
VIT_06s0004g00690.t01 Wine grape nucleus 63.19 54.33
HORVU2Hr1G074420.1 Barley cytosol 13.89 54.05
TraesCS5B01G377900.1 Wheat cytosol 50.35 53.9
Bra017264.1-P Field mustard endoplasmic reticulum, extracellular 31.77 53.82
HORVU4Hr1G074540.1 Barley cytosol 23.44 53.78
Zm00001d047402_P001 Maize cytosol 50.0 53.53
Os03t0374500-00 Rice nucleus 52.43 52.34
Solyc01g005800.2.1 Tomato nucleus 59.72 52.04
TraesCS2A01G154900.1 Wheat cytosol 50.52 51.6
EER92212 Sorghum cytosol 51.39 51.57
TraesCS2D01G160200.1 Wheat cytosol 50.87 51.31
Os07t0633400-01 Rice cytosol 52.08 51.28
GSMUA_Achr9P21650_001 Banana plastid, vacuole 50.17 50.88
TraesCS2B01G180000.1 Wheat cytosol 50.52 50.87
GSMUA_Achr4P11190_001 Banana cytosol 51.74 50.85
HORVU2Hr1G028140.2 Barley cytosol 50.0 50.79
HORVU5Hr1G093140.18 Barley cytosol, nucleus 50.35 50.79
Bra011409.1-P Field mustard plastid 41.32 50.42
Bra014570.1-P Field mustard nucleus 48.26 49.38
HORVU2Hr1G028150.1 Barley cytosol 50.0 48.73
HORVU7Hr1G052820.45 Barley cytosol 20.83 48.58
HORVU4Hr1G052500.37 Barley cytosol, nucleus 20.49 47.77
HORVU5Hr1G023670.50 Barley cytosol 20.49 47.77
TraesCS5D01G385200.2 Wheat cytosol 46.01 47.58
EER97603 Sorghum nucleus 51.22 46.6
Bra034295.1-P Field mustard plastid 42.19 46.37
Bra028537.1-P Field mustard cytosol 36.46 46.05
Bra019642.1-P Field mustard cytosol 36.28 45.83
GSMUA_Achr6P01560_001 Banana mitochondrion 21.01 45.32
Zm00001d022245_P001 Maize cytosol 51.56 44.93
Os10t0411500-01 Rice plasma membrane 50.52 44.84
GSMUA_Achr3P29200_001 Banana cytosol 49.48 44.53
HORVU3Hr1G010590.3 Barley nucleus 22.92 44.15
TraesCS4A01G021000.1 Wheat nucleus 46.7 44.1
HORVU5Hr1G120690.3 Barley nucleus 22.92 43.56
Os03t0167200-01 Rice plasma membrane 46.01 43.44
TraesCS4D01G281600.1 Wheat nucleus 46.18 43.39
Bra002773.1-P Field mustard cytosol 38.19 43.39
KXG40105 Sorghum cytosol 47.92 43.33
Bra034546.1-P Field mustard cytosol 40.8 42.73
HORVU4Hr1G074550.4 Barley cytosol 45.31 42.65
Zm00001d027815_P002 Maize nucleus 47.22 42.37
Zm00001d032981_P001 Maize cytosol 47.92 42.07
GSMUA_Achr6P01510_001 Banana nucleus 14.93 41.55
EER94258 Sorghum cytosol 48.26 41.37
TraesCS4B01G282600.2 Wheat nucleus 46.53 40.06
Bra035643.1-P Field mustard cytosol 38.37 39.18
HORVU2Hr1G074410.1 Barley cytosol, nucleus 9.55 37.67
Zm00001d024699_P001 Maize nucleus 20.66 37.66
TraesCS2B01G401000.1 Wheat plastid 19.44 32.28
HORVU5Hr1G110660.2 Barley mitochondrion 6.94 32.26
Protein Annotations
EnsemblPlants:Bra027414.1EnsemblPlants:Bra027414.1-PEnsemblPlantsGene:Bra027414PANTHER:PTHR31250PANTHER:PTHR31250:SF4SEG:seg
UniParc:UPI0002547F9AUniProt:M4EF52MapMan:35.1:::
Description
AT3G13600 (E=2e-224) | calmodulin-binding family protein
Coordinates
chrA05:-:20783503..20785668
Molecular Weight (calculated)
65800.9 Da
IEP (calculated)
6.520
GRAVY (calculated)
-0.644
Length
576 amino acids
Sequence
(BLAST)
001: MGVSFSCPYT KQEDVEASLD SVTVKSISFG DDNECKTPKR SVNFNDRTLE PTILKSMGSG GKMVVEKSVS FKGMQLERMM ENGFEIDNAE IARELSVLDP
101: KNPKHEAAIK LQKVYKSFRT RRKLADCAVL VEQSWWKLLD FAELKRSSIS FFDIEKHETA ISRWSRARTR AAKVGKGLSK NGKAQKLALQ HWLEAIDPRH
201: RYGHNLHFYY NKWLHCQSRE PFFYWLDIGE GKEVNLVEKC PRLKLQQQCI KYLGPMERKA YEVVVEEGKF FYKNSGEMLH TSSMEESDSK WIFVLSTSKV
301: LYVGKKKKGT FQHSSFLAGG ATVAAGRLVV ESGVLKAVWP HSGHYQPTEE NFLDFLSFLR ENNVDITDVK MSPTDEDEFS LYKQRSTHMR NHSLEEDLEP
401: EKSIILQDKV DPIQEETTPV MANTETPKKM ESIKVSEDYD SGDDEEEEEE IFDLEQEPIP SEHSSPRGGE ETRESEVVKI PEESILKRIN SKKESRSFQL
501: GKQLSCKWTT GAGPRIGCVR DYPSELQFQA LEQVNLSPRS ASVSRLCFSS LSHTQTPQMS PLWRGMSLPA DIITHS
Best Arabidopsis Sequence Match ( AT3G13600.2 )
(BLAST)
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.