Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G074420.1 | Barley | cytosol | 46.15 | 93.24 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 43.81 | 89.73 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 89.97 | 88.78 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 25.75 | 62.1 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 27.76 | 53.9 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 93.65 | 49.04 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 57.53 | 46.61 |
| CDY06038 | Canola | mitochondrion, nucleus | 11.04 | 45.83 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 30.1 | 36.44 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 30.1 | 36.44 |
| EER92212 | Sorghum | cytosol | 69.57 | 36.24 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 29.77 | 36.03 |
| Zm00001d047402_P001 | Maize | cytosol | 61.54 | 34.2 |
| Os03t0374500-00 | Rice | nucleus | 65.89 | 34.14 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 25.42 | 30.28 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 20.4 | 29.47 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 55.85 | 29.45 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 56.19 | 28.43 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 36.79 | 27.5 |
| Bra021491.1-P | Field mustard | nucleus | 43.81 | 26.57 |
| Bra001512.1-P | Field mustard | cytosol | 43.14 | 24.39 |
| PGSC0003DMT400080788 | Potato | nucleus | 43.48 | 23.85 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 38.46 | 23.81 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 37.12 | 23.22 |
| KRH71773 | Soybean | nucleus | 43.14 | 23.04 |
| Bra027414.1-P | Field mustard | nucleus | 44.15 | 22.92 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 40.8 | 22.89 |
| Solyc01g044420.2.1 | Tomato | nucleus | 42.47 | 22.05 |
| KRG97321 | Soybean | nucleus | 40.8 | 21.82 |
| AT3G13600.1 | Thale cress | nucleus | 44.15 | 21.82 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 44.48 | 21.73 |
| Bra014570.1-P | Field mustard | nucleus | 40.47 | 21.49 |
| AT3G58480.1 | Thale cress | nucleus | 41.14 | 21.39 |
| KRH38004 | Soybean | cytosol | 42.47 | 21.34 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 47.16 | 21.04 |
| KRH58931 | Soybean | nucleus | 44.82 | 20.43 |
| Solyc01g005800.2.1 | Tomato | nucleus | 45.15 | 20.42 |
| KRH42833 | Soybean | cytosol | 44.15 | 19.97 |
| HORVU3Hr1G049640.1 | Barley | plastid | 36.45 | 19.78 |
| Solyc10g078650.1.1 | Tomato | nucleus | 39.46 | 19.44 |
| PGSC0003DMT400021529 | Potato | cytosol | 40.13 | 18.75 |
| Solyc10g080640.1.1 | Tomato | nucleus | 37.79 | 17.85 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 37.46 | 15.98 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 31.44 | 15.44 |
| CDY45027 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G010590.3 | EnsemblPlantsGene:HORVU3Hr1G010590 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF16 | SEG:seg | UniParc:UPI000B47C521 |
| UniProt:A0A287K347 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:23362879..23365279
Molecular Weight (calculated)
33186.9 Da
IEP (calculated)
9.520
GRAVY (calculated)
-0.804
Length
299 amino acids
Sequence
(BLAST)
(BLAST)
001: MYRKSRQIID TSFGPRDAKW IFVLSTSKSH YVGQKKKGKS QHSSFLVGGA TSAAGRLVAE NGTLKAIWPH SGHYRPTEEN FQEFKSFLKD NLVDLTHVKM
101: SPAEEDEEFW GSLKRIASEN NKYEDGPVAP EETGPLQKAQ LVQTTSTQSE KREEPAVATP GSSEDAKATE ASTSSHMSEN DLQRAKKAPV PREKILQRIN
201: SKKDMKSYQL GKQLSFKWST GAGPRIGCVR DYPSELQAHA LEQMNLSPRC ATGSVCTRFA SPLRRSFNSI VTRGCENETS TPRGELQSPL QHGVVADER
101: SPAEEDEEFW GSLKRIASEN NKYEDGPVAP EETGPLQKAQ LVQTTSTQSE KREEPAVATP GSSEDAKATE ASTSSHMSEN DLQRAKKAPV PREKILQRIN
201: SKKDMKSYQL GKQLSFKWST GAGPRIGCVR DYPSELQAHA LEQMNLSPRC ATGSVCTRFA SPLRRSFNSI VTRGCENETS TPRGELQSPL QHGVVADER
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.