Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY00568 | Canola | nucleus | 84.0 | 86.25 |
| Bra014570.1-P | Field mustard | nucleus | 84.17 | 85.97 |
| CDX88987 | Canola | nucleus | 82.09 | 85.51 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 52.87 | 57.04 |
| KRH71773 | Soybean | nucleus | 54.43 | 55.89 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 23.83 | 54.58 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 34.43 | 53.66 |
| KRH38004 | Soybean | cytosol | 54.09 | 52.27 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 35.65 | 51.25 |
| GSMUA_Achr4P06580_001 | Banana | cytosol | 46.78 | 49.72 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 12.7 | 49.32 |
| GSMUA_Achr4P13570_001 | Banana | cytosol | 46.61 | 49.26 |
| GSMUA_Achr9P21650_001 | Banana | plastid, vacuole | 48.35 | 48.94 |
| TraesCS5A01G375700.1 | Wheat | cytosol | 44.7 | 48.13 |
| TraesCS5B01G377900.1 | Wheat | cytosol | 44.7 | 47.77 |
| Zm00001d047402_P001 | Maize | cytosol | 44.35 | 47.4 |
| Os03t0374500-00 | Rice | nucleus | 47.48 | 47.31 |
| Solyc10g078650.1.1 | Tomato | nucleus | 49.91 | 47.28 |
| GSMUA_Achr6P01520_001 | Banana | cytosol | 19.48 | 47.26 |
| AT3G13600.1 | Thale cress | nucleus | 49.57 | 47.11 |
| Solyc10g080640.1.1 | Tomato | nucleus | 51.3 | 46.6 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 20.0 | 46.56 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 20.0 | 46.56 |
| EER92212 | Sorghum | cytosol | 46.43 | 46.52 |
| GSMUA_Achr4P11190_001 | Banana | cytosol | 47.3 | 46.42 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 45.91 | 46.23 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 19.83 | 46.15 |
| TraesCS2A01G154900.1 | Wheat | cytosol | 45.22 | 46.1 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 45.39 | 46.03 |
| TraesCS2D01G160200.1 | Wheat | cytosol | 45.39 | 45.71 |
| TraesCS2B01G180000.1 | Wheat | cytosol | 45.39 | 45.63 |
| Os07t0633400-01 | Rice | cytosol | 45.91 | 45.13 |
| PGSC0003DMT400021529 | Potato | cytosol | 49.91 | 44.84 |
| AT2G26190.1 | Thale cress | plastid | 41.04 | 44.36 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 45.39 | 44.16 |
| AT3G52870.1 | Thale cress | cytosol | 34.61 | 43.64 |
| EER97603 | Sorghum | nucleus | 46.61 | 42.34 |
| AT5G57010.1 | Thale cress | cytosol | 36.35 | 42.22 |
| TraesCS5D01G385200.2 | Wheat | cytosol | 40.87 | 42.19 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 44.52 | 41.76 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 44.35 | 41.67 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 44.17 | 41.64 |
| AT4G33050.5 | Thale cress | plastid | 40.52 | 41.61 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 21.39 | 41.14 |
| Os03t0167200-01 | Rice | plasma membrane | 43.3 | 40.82 |
| GSMUA_Achr3P29200_001 | Banana | cytosol | 45.39 | 40.78 |
| GSMUA_Achr6P01560_001 | Banana | mitochondrion | 18.78 | 40.45 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 21.22 | 40.26 |
| Os10t0411500-01 | Rice | plasma membrane | 45.04 | 39.91 |
| Zm00001d022245_P001 | Maize | cytosol | 45.74 | 39.79 |
| KXG40105 | Sorghum | cytosol | 43.83 | 39.56 |
| Zm00001d027815_P002 | Maize | nucleus | 43.3 | 38.78 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 47.13 | 38.66 |
| Zm00001d032981_P001 | Maize | cytosol | 44.0 | 38.57 |
| EER94258 | Sorghum | cytosol | 45.04 | 38.54 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 44.7 | 38.42 |
| GSMUA_Achr6P01510_001 | Banana | nucleus | 13.39 | 37.2 |
| Zm00001d024699_P001 | Maize | nucleus | 19.48 | 35.44 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 8.7 | 34.25 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 6.09 | 28.23 |
| TraesCS2B01G401000.1 | Wheat | plastid | 15.48 | 25.65 |
Protein Annotations
| MapMan:35.1 | EntrezGene:825017 | UniProt:A0A178VKX9 | ProteinID:AEE79787.1 | ArrayExpress:AT3G58480 | EnsemblPlantsGene:AT3G58480 |
| RefSeq:AT3G58480 | TAIR:AT3G58480 | RefSeq:AT3G58480-TAIR-G | EnsemblPlants:AT3G58480.1 | TAIR:AT3G58480.1 | ProteinID:CAB68186.1 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0008150 |
| RefSeq:NP_191407.1 | ProteinID:OAP07027.1 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF14 | UniProt:Q9M2G8 | UniParc:UPI000009E66E |
| SEG:seg | : | : | : | : | : |
Description
IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
Coordinates
chr3:+:21629072..21632116
Molecular Weight (calculated)
66371.1 Da
IEP (calculated)
6.525
GRAVY (calculated)
-0.775
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.