Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G052820.45 | Barley | cytosol | 97.98 | 97.98 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 96.36 | 96.36 |
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 58.3 | 93.51 |
| HORVU4Hr1G074540.1 | Barley | cytosol | 63.97 | 62.95 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 33.2 | 55.41 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 49.39 | 33.06 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 75.71 | 30.56 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 49.39 | 30.5 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 37.25 | 30.36 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 36.44 | 30.1 |
| Os03t0167200-01 | Rice | plasma membrane | 65.99 | 26.72 |
| KXG40105 | Sorghum | cytosol | 64.78 | 25.12 |
| Zm00001d027815_P002 | Maize | nucleus | 64.37 | 24.77 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 55.47 | 23.99 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 53.85 | 23.46 |
| Bra021491.1-P | Field mustard | nucleus | 46.56 | 23.33 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 53.85 | 22.5 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 47.77 | 22.14 |
| Bra001512.1-P | Field mustard | cytosol | 45.34 | 21.17 |
| KRH71773 | Soybean | nucleus | 46.96 | 20.71 |
| PGSC0003DMT400080788 | Potato | nucleus | 45.34 | 20.55 |
| Bra027414.1-P | Field mustard | nucleus | 47.77 | 20.49 |
| Bra014570.1-P | Field mustard | nucleus | 46.56 | 20.43 |
| Solyc01g044420.2.1 | Tomato | nucleus | 47.37 | 20.31 |
| AT3G58480.1 | Thale cress | nucleus | 46.56 | 20.0 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 38.87 | 19.88 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 38.46 | 19.87 |
| KRG97321 | Soybean | nucleus | 44.53 | 19.68 |
| KRH38004 | Soybean | cytosol | 47.37 | 19.66 |
| AT3G13600.1 | Thale cress | nucleus | 46.96 | 19.17 |
| HORVU3Hr1G049640.1 | Barley | plastid | 42.51 | 19.06 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 50.61 | 18.66 |
| Solyc10g080640.1.1 | Tomato | nucleus | 47.37 | 18.48 |
| Solyc10g078650.1.1 | Tomato | nucleus | 44.13 | 17.96 |
| Solyc01g005800.2.1 | Tomato | nucleus | 47.77 | 17.85 |
| KRH58931 | Soybean | nucleus | 46.56 | 17.53 |
| KRH42833 | Soybean | cytosol | 46.56 | 17.4 |
| PGSC0003DMT400021529 | Potato | cytosol | 44.53 | 17.19 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 42.11 | 17.08 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 45.75 | 16.12 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 3.24 | 6.45 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 3.24 | 5.48 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G023670.50 | EnsemblPlantsGene:HORVU5Hr1G023670 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR31250 |
| PANTHER:PTHR31250:SF5 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4622BB | UniProt:A0A287QN70 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:-:124836844..124839593
Molecular Weight (calculated)
27975.7 Da
IEP (calculated)
9.203
GRAVY (calculated)
-0.411
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAACRETS KKQHHDHHHH ESMTSRKSRL DVGEGKEINL EDHCPRWKLL QQCIRYLGPG EREFYEVTIE NKMMMYRLSR KIVDTSEGPK DAKWIFVLST
101: TKILYIGSKS KGTFQHSSFL AGGATSAAGR LVFANGILKA VWPHSGHYRP TEANFREFMK YLRKRNVDLT DVKLSPTEGE EDEWLRRSLS QMDLSAMVLL
201: PLLIYGFKLG ITGAAISTVA SHFSPCPCAL LLPAVHPTES GRRDRVC
101: TKILYIGSKS KGTFQHSSFL AGGATSAAGR LVFANGILKA VWPHSGHYRP TEANFREFMK YLRKRNVDLT DVKLSPTEGE EDEWLRRSLS QMDLSAMVLL
201: PLLIYGFKLG ITGAAISTVA SHFSPCPCAL LLPAVHPTES GRRDRVC
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.