Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G066990.1 | Barley | mitochondrion | 43.03 | 70.13 |
| HORVU7Hr1G052820.45 | Barley | cytosol | 63.35 | 64.37 |
| HORVU5Hr1G023670.50 | Barley | cytosol | 62.95 | 63.97 |
| HORVU4Hr1G052500.37 | Barley | cytosol, nucleus | 62.55 | 63.56 |
| HORVU2Hr1G074420.1 | Barley | cytosol | 30.68 | 52.03 |
| HORVU1Hr1G045060.3 | Barley | nucleus | 57.37 | 39.02 |
| HORVU2Hr1G015200.2 | Barley | cytosol | 58.17 | 36.5 |
| HORVU4Hr1G074550.4 | Barley | cytosol | 80.88 | 33.17 |
| TraesCS4D01G281600.1 | Wheat | nucleus | 77.29 | 31.65 |
| TraesCS4A01G021000.1 | Wheat | nucleus | 76.49 | 31.48 |
| TraesCS4B01G282600.2 | Wheat | nucleus | 77.29 | 29.0 |
| Os03t0167200-01 | Rice | plasma membrane | 68.13 | 28.03 |
| Bra021491.1-P | Field mustard | nucleus | 52.99 | 26.98 |
| KXG40105 | Sorghum | cytosol | 68.13 | 26.84 |
| HORVU5Hr1G093140.18 | Barley | cytosol, nucleus | 60.16 | 26.44 |
| HORVU2Hr1G028140.2 | Barley | cytosol | 59.36 | 26.28 |
| Zm00001d027815_P002 | Maize | nucleus | 66.93 | 26.17 |
| VIT_08s0007g07190.t01 | Wine grape | cytosol | 55.38 | 26.08 |
| HORVU3Hr1G010590.3 | Barley | nucleus | 30.28 | 25.42 |
| HORVU5Hr1G120690.3 | Barley | nucleus | 30.68 | 25.41 |
| HORVU2Hr1G028150.1 | Barley | cytosol | 59.36 | 25.21 |
| KRH71773 | Soybean | nucleus | 54.58 | 24.46 |
| Bra014570.1-P | Field mustard | nucleus | 54.58 | 24.33 |
| AT3G58480.1 | Thale cress | nucleus | 54.58 | 23.83 |
| Bra027414.1-P | Field mustard | nucleus | 53.78 | 23.44 |
| KRH38004 | Soybean | cytosol | 55.38 | 23.36 |
| Solyc01g044420.2.1 | Tomato | nucleus | 52.99 | 23.09 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 43.82 | 23.01 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 44.22 | 22.98 |
| KRG97321 | Soybean | nucleus | 51.0 | 22.9 |
| Bra001512.1-P | Field mustard | cytosol | 48.21 | 22.87 |
| AT3G13600.1 | Thale cress | nucleus | 53.78 | 22.31 |
| PGSC0003DMT400080788 | Potato | nucleus | 48.21 | 22.2 |
| HORVU3Hr1G049640.1 | Barley | plastid | 47.81 | 21.78 |
| HORVU1Hr1G028900.11 | Barley | cytosol, mitochondrion, nucleus | 50.2 | 20.69 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 54.98 | 20.6 |
| Solyc10g078650.1.1 | Tomato | nucleus | 49.8 | 20.59 |
| Solyc10g080640.1.1 | Tomato | nucleus | 51.79 | 20.54 |
| Solyc01g005800.2.1 | Tomato | nucleus | 52.19 | 19.82 |
| KRH42833 | Soybean | cytosol | 51.79 | 19.67 |
| PGSC0003DMT400021529 | Potato | cytosol | 49.8 | 19.53 |
| KRH58931 | Soybean | nucleus | 51.0 | 19.51 |
| PGSC0003DMT400060938 | Potato | nucleus, plastid | 48.21 | 17.26 |
| HORVU2Hr1G074410.1 | Barley | cytosol, nucleus | 0.4 | 0.68 |
| HORVU5Hr1G110660.2 | Barley | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G074540.1 | EnsemblPlantsGene:HORVU4Hr1G074540 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF5 | SEG:seg | UniParc:UPI000B4710C4 |
| UniProt:A0A287PNP2 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:594673404..594675568
Molecular Weight (calculated)
25557.8 Da
IEP (calculated)
9.914
GRAVY (calculated)
-0.588
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTGQNEGCQ GRQRFSPRMK RTQKLALQHW LEAIDPRHRY GHNLHYYYKC WLRCDSQQPF FYWLDVGEGK EINLEDHCPR WKLLQQCIRY LGPREREFYE
101: VTIENKMMMY RLSRKIVDTS EGPKDAKWIF VLSTTKILYI GSKSKGTFQH SSFLAGGATS AAGRLVVANG ILKAVWPHSG HYRPTEANFR EFMKYLRKRN
201: VDLTDVKLSP TEGEEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXM R
101: VTIENKMMMY RLSRKIVDTS EGPKDAKWIF VLSTTKILYI GSKSKGTFQH SSFLAGGATS AAGRLVVANG ILKAVWPHSG HYRPTEANFR EFMKYLRKRN
201: VDLTDVKLSP TEGEEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXM R
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.