Factsheet for Os03t0374500-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G074420.1	Barley	cytosol	20.28	79.05
HORVU2Hr1G015200.2	Barley	cytosol	53.9	77.75
TraesCS5B01G377900.1	Wheat	cytosol	71.75	76.95
TraesCS5A01G375700.1	Wheat	cytosol	71.06	76.78
Zm00001d047402_P001	Maize	cytosol	70.19	75.28
HORVU1Hr1G045060.3	Barley	nucleus	48.01	75.07
EER92212	Sorghum	cytosol	73.48	73.87
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	72.1	72.85
TraesCS5D01G385200.2	Wheat	cytosol	67.07	69.48
Os07t0633400-01	Rice	cytosol	67.94	67.01
HORVU3Hr1G010590.3	Barley	nucleus	34.14	65.89
HORVU5Hr1G120690.3	Barley	nucleus	33.8	64.36
Bra021491.1-P	Field mustard	nucleus	48.53	56.8
VIT_08s0007g07190.t01	Wine grape	cytosol	49.91	54.03
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	13.52	53.42
Bra027414.1-P	Field mustard	nucleus	52.34	52.43
Os10t0411500-01	Rice	plasma membrane	57.89	51.46
Bra001512.1-P	Field mustard	cytosol	46.45	50.66
AT3G13600.1	Thale cress	nucleus	53.03	50.58
CDY45027	Canola	extracellular	1.04	50.0
Os03t0167200-01	Rice	plasma membrane	52.51	49.67
Solyc01g044420.2.1	Tomato	nucleus	48.87	48.96
PGSC0003DMT400080788	Potato	nucleus	45.75	48.44
Bra014570.1-P	Field mustard	nucleus	47.14	48.31
KRG97321	Soybean	nucleus	46.1	47.59
KRH71773	Soybean	nucleus	46.1	47.5
AT3G58480.1	Thale cress	nucleus	47.31	47.48
CDY06038	Canola	mitochondrion, nucleus	5.89	47.22
Os12t0149900-01	Rice	cytosol	38.99	47.17
KRH58931	Soybean	nucleus	52.86	46.49
KRH42833	Soybean	cytosol	52.69	45.99
VIT_06s0004g00690.t01	Wine grape	nucleus	53.03	45.67
KRH38004	Soybean	cytosol	46.79	45.38
Os11t0151002-00	Rice	cytosol	37.26	45.36
GSMUA_Achr6P01510_001	Banana	nucleus	16.12	44.93
Solyc10g080640.1.1	Tomato	nucleus	48.53	44.23
Os05t0197300-01	Rice	cytosol	41.94	43.53
Solyc01g005800.2.1	Tomato	nucleus	49.39	43.12
Solyc10g078650.1.1	Tomato	nucleus	45.23	43.0
HORVU5Hr1G110660.2	Barley	mitochondrion	9.01	41.94
PGSC0003DMT400021529	Potato	cytosol	46.45	41.88
Os01t0570800-01	Rice	plastid	40.03	40.6
PGSC0003DMT400060938	Potato	nucleus, plastid	44.37	36.52
TraesCS2B01G401000.1	Wheat	plastid	19.93	33.14

Protein Annotations

EnsemblPlants:Os03t0374500-00	EnsemblPlantsGene:Os03g0374500	EntrezGene:9272317	ncoils:Coil	PANTHER:PTHR31250	PANTHER:PTHR31250:SF16
ProteinID:AAP46201.1	ProteinID:ABF96205.1	ProteinID:BAS84390.1	RefSeq:XP_015629304.1	SEG:seg	UniParc:UPI00001A2F09
UniProt:Q7Y169	MapMan:35.1	:	:	:	:

Description

Similar to calmodulin-binding family protein. (Os03t0374500-00)

Coordinates

chr3:-:14739099..14741603

Molecular Weight (calculated)

63233.9 Da

IEP (calculated)

6.847

GRAVY (calculated)

-0.560

Length

577 amino acids

Sequence
(BLAST)

001: MGVLFSCPVD DYDALEESAA AAAAASSESN SGGGKPAAIL KALGSGKLLI EGSLSFKRDQ QMSPTSLLQV ETEISIKPAA ADIAAAPRAR FAADGGAAAA
101: ESPKHEAAAV KLQKVYKSFR TRRQLADCAV LVEQSWWKLL DFALLKRSSV SFFDIEKQET AVSRWSRART RAAKVGKGLS KDEKAQKLAL QHWLEAIDPR
201: HRYGHNLHYY YDTWLHCESK QPFFYWLDVG EGKEINLEGK CSRSKLLSQC IKYLGPKERE DYEVILEDGK FLYKKSRQIL DTSCGPRDAK WIFVLSTSKS
301: LYVGQKKKGK FQHSSFLAGG ATSAAGRLVV ENGTLKAIWP HSGHYRPTEE NFEEFKSFLN DNSVDLTDVK MSPAEEDEEF WGSLKRISSE SYPKNTATDN
401: SEDQAAEAEE TGNSQMPRVS DEPTCAEIDG CDEPAATRRV DSSSAVAAAA ENTEAEEEDQ EGGGEQAPVP REKILERINS KKGMRSYQLG KQLSFRWTTG
501: AGPRIGCVRD YPSELQLRAL EQVNLSPRSA AAASASSRFS SPQRRSFNGA AAPATPREAL RPSPLQHGLV ATVAAAD

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.