CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047402_P001	Maize	cytosol	79.27	84.57
TraesCS5B01G377900.1	Wheat	cytosol	74.74	79.74
TraesCS5A01G375700.1	Wheat	cytosol	73.69	79.21
HORVU2Hr1G074420.1	Barley	cytosol	20.38	79.05
HORVU2Hr1G015200.2	Barley	cytosol	53.83	77.25
HORVU5Hr1G093140.18	Barley	cytosol, nucleus	75.09	75.48
HORVU1Hr1G045060.3	Barley	nucleus	48.26	75.07
Os03t0374500-00	Rice	nucleus	73.87	73.48
TraesCS5D01G385200.2	Wheat	cytosol	68.82	70.92
HORVU3Hr1G010590.3	Barley	nucleus	36.24	69.57
HORVU5Hr1G120690.3	Barley	nucleus	36.06	68.32
HORVU2Hr1G074410.1	Barley	cytosol, nucleus	15.51	60.96
EER97603	Sorghum	nucleus	65.68	59.56
Bra021491.1-P	Field mustard	nucleus	48.26	56.19
VIT_08s0007g07190.t01	Wine grape	cytosol	48.61	52.35
Bra027414.1-P	Field mustard	nucleus	51.57	51.39
Bra001512.1-P	Field mustard	cytosol	46.52	50.47
CDY45027	Canola	extracellular	1.05	50.0
AT3G13600.1	Thale cress	nucleus	52.26	49.59
EER94258	Sorghum	cytosol	56.79	48.51
HORVU5Hr1G110660.2	Barley	mitochondrion	10.45	48.39
EES09264	Sorghum	cytosol	38.15	48.13
KXG40105	Sorghum	cytosol	53.31	48.04
Bra014570.1-P	Field mustard	nucleus	47.04	47.96
Solyc01g044420.2.1	Tomato	nucleus	48.08	47.92
PGSC0003DMT400080788	Potato	nucleus	45.12	47.52
EES16640	Sorghum	cytosol	37.28	47.35
KRH71773	Soybean	nucleus	46.17	47.32
KRG97321	Soybean	nucleus	45.99	47.23
KRH58931	Soybean	nucleus	53.48	46.8
KRH42833	Soybean	cytosol	53.66	46.6
AT3G58480.1	Thale cress	nucleus	46.52	46.43
GSMUA_Achr6P01510_001	Banana	nucleus	16.55	45.89
CDY06038	Canola	mitochondrion, nucleus	5.75	45.83
KRH38004	Soybean	cytosol	47.04	45.38
VIT_06s0004g00690.t01	Wine grape	nucleus	52.44	44.93
EES09263	Sorghum	cytosol	34.15	43.17
Solyc10g080640.1.1	Tomato	nucleus	47.56	43.13
KXG21506	Sorghum	cytosol	41.64	42.91
Solyc10g078650.1.1	Tomato	nucleus	45.3	42.83
Solyc01g005800.2.1	Tomato	nucleus	48.95	42.51
PGSC0003DMT400021529	Potato	cytosol	46.34	41.56
EES03151	Sorghum	mitochondrion, plastid	39.37	39.24
EES18807	Sorghum	plastid	38.68	38.61
PGSC0003DMT400060938	Potato	nucleus, plastid	43.9	35.95
TraesCS2B01G401000.1	Wheat	plastid	20.38	33.72

Protein Annotations

EnsemblPlants:EER92212	EnsemblPlantsGene:SORBI_3001G358200	EntrezGene:8080487	PANTHER:PTHR31250	PANTHER:PTHR31250:SF16	ProteinID:EER92212
ProteinID:EER92212.1	RefSeq:XP_002465214.1	SEG:seg	UniParc:UPI0001A821DF	UniProt:C5WYN4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr1:+:64798805..64802009

Molecular Weight (calculated)

63596.8 Da

IEP (calculated)

7.667

GRAVY (calculated)

-0.570

Length

574 amino acids

Sequence
(BLAST)

001: MGVLFSCPAD DYDPLDVQEE APAPATSSAA GAGEPAPAIL RASLSSGKLR IEGSLSFKRA QAALLQVETE ISIRTADAAA PGPLSLPCRD REREVTTRAR
101: FAEPAAASDS PKHEAAALRL QKVYKSFRTR RQLADCAVLV EQSWWKLLDF ALLKRSSVSF FDIEKQETAM SKWSRARTRV AKVGKGLLKD DNAQKLALQH
201: WLEAIDPRHR YGHNLHYYYD CWLHSESKQP FFYWLDVGEG REINLEGKCS RSKLLSQCIK YLGPKEREDY EVVIEDGKFL YKKSGRILDT SCGPRDAKWI
301: FVLSTSKNLY VGQKKKGTFQ HSSFLAGGAT SAAGRLVVEN GTLKAIWPHS GHYRPTEENF QEFKSFLRDN LVDLTDVKMS PDEEDEEFWG SLRRITSESE
401: KTGDHTTAAP EETGPCQAIP EAGSTETQKC EQETATARPE PSEGVVDQEA AEEQQAPVPR EKILQRINSK KEMKSYQLGK QLSFKWTTGA GPRIGCVRDY
501: PSELQLQALE QVNLSPRCSA AAAAASRFAS PLRRSFNQPA TATATRGCEA SSTPREAFRS PLQHGALALA ATAD

Best Arabidopsis Sequence Match ( AT3G58480.1 )
(BLAST)

001: METKTILRSI SFNDIDSDST ITESPEARKT LYNRSLSGKG TQRSRISPGD VENNFSIKPL TFMKEDDRYK MRIWKPVCEN EHAKEFLALL LGDGTYQAAL
101: KLQKVYRSFR TRRRLADCAV VVEQRWWKVL DFAELKRSSI SFFEIEKQET AVSRWSRART RAAKVGKGLS KDEKARKLAL QHWLEAIDPR HRYGHNLQFY
201: YHAWLHCDSK QPFFYWLDIG QGKELNHERC PRSKLYQQSI KYLGPTEREA YEVIIEDGKL MYKQSGIVLD TKEGPPDAKW IFVLSVSKIL YVGMKKKGNF
301: QHSSFLAGGA TLSAGRIVVD DGVLKAVWPH SGHYLPTEEN FQAFMSFLRE NNVDLANVKK NPDEEDGEAP AKVKRMPSRI KETEEEHCDF VDAETGFSPN
401: TKPNNHAELQ TLSRFHSKLS RLDEIPDEDD NMIEEEQDDE EEPETPSEQG YETAEETFIA EEEFTYPKSN LFDEDIEDYE KPVLKEKIMR RIDSHKGIKS
501: YQLAERLHSR WSTGAGPRIS CMRDYPSELQ FRVLEQAHLS PRASSNSSKI SPFAPVRTRG TSLGRSPLAE ELENL

Arabidopsis Description

IQM6IQ domain-containing protein IQM6 [Source:UniProtKB/Swiss-Prot;Acc:Q9M2G8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.