Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027414.1-P | Field mustard | nucleus | 95.12 | 94.79 |
| CDX97500 | Canola | nucleus | 95.12 | 94.79 |
| CDY60813 | Canola | cytosol | 72.13 | 89.61 |
| CDY37478 | Canola | nucleus | 85.19 | 88.11 |
| AT3G13600.1 | Thale cress | nucleus | 88.15 | 83.64 |
| CDX75719 | Canola | cytosol | 67.77 | 74.52 |
| Solyc01g044420.2.1 | Tomato | nucleus | 58.36 | 58.16 |
| PGSC0003DMT400080788 | Potato | nucleus | 54.88 | 57.8 |
| KRH58931 | Soybean | nucleus | 65.68 | 57.47 |
| KRH42833 | Soybean | cytosol | 65.33 | 56.73 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 35.37 | 56.08 |
| KRG97321 | Soybean | nucleus | 54.36 | 55.81 |
| CDX82532 | Canola | cytosol | 47.39 | 54.18 |
| VIT_06s0004g00690.t01 | Wine grape | nucleus | 63.07 | 54.03 |
| Solyc01g005800.2.1 | Tomato | nucleus | 59.76 | 51.89 |
| CDX68935 | Canola | plastid | 41.46 | 50.75 |
| CDX88987 | Canola | nucleus | 48.43 | 50.36 |
| CDX77035 | Canola | plastid | 41.46 | 49.69 |
| CDY00568 | Canola | nucleus | 47.91 | 49.11 |
| CDY35312 | Canola | plastid | 42.51 | 46.65 |
| CDY06038 | Canola | mitochondrion, nucleus | 5.75 | 45.83 |
| CDY13342 | Canola | cytosol | 36.24 | 45.61 |
| CDX67541 | Canola | cytosol | 36.24 | 45.61 |
| CDY45026 | Canola | cytosol | 40.59 | 45.24 |
| CDX95381 | Canola | cytosol | 35.71 | 44.96 |
| CDX76252 | Canola | cytosol | 35.71 | 44.96 |
| CDY13341 | Canola | cytosol | 13.76 | 43.65 |
| CDY28281 | Canola | cytosol, plastid | 41.99 | 43.27 |
| CDY45027 | Canola | extracellular | 0.87 | 41.67 |
| CDX80650 | Canola | extracellular | 5.05 | 33.33 |
Protein Annotations
| EnsemblPlants:CDY23623 | EnsemblPlantsGene:GSBRNA2T00023846001 | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF4 | ProteinID:CDY23623 | ProteinID:CDY23623.1 |
| SEG:seg | UniParc:UPI0004EAD04A | UniProt:A0A078GGA1 | MapMan:35.1 | : | : |
Description
BnaC05g39710DBnaC05g39710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GGA1]
Coordinates
chrLK032145:+:483681..485857
Molecular Weight (calculated)
65588.4 Da
IEP (calculated)
6.016
GRAVY (calculated)
-0.651
Length
574 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVSFSYPFT KQEDVEVALD SVTVKSISFG DEDECKTPKR SVNFNDRTLE PTILKSIGSG GKMVVEKSVS FKGMQLERTI ENGFEIDNAE IARELSVLDP
101: KNPKHEAAIK LQKVYKSFRT RRKLADCAVL VEQSWWKLLD FAELKRSSIS FFDIEKHETA ISRWSRARTR AAKVGKGLSK NGKAQKLALQ HWLEAIDPRH
201: RYGHNLHFYY NKWLHCQSRE PFFYWLDIGE GKEVNLVEKC PRLKLQQQCI KYLGPMERKA YEVVVEEGKF FYKTSGEMLH SSMEESDSKW IFVLSTSKVL
301: YVGKKKKGTF QHSSFLAGGA TVAAGRLVVE SGVLKAVWPH SGHYQPTEDN FLDFLSFLRE NNVDITDVKM SPTDEDEFSL YKQRSTHMRN HSLEEDLESE
401: KTIILQDKAD PIEEEEEEET TPVTANIETP KKMDSTQVSE DYDSGDDEEE EEEIFNLEQE QSSPRGGEET RESEVVKIPE ESILKRINSK KESRSFQLGK
501: QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVHLSPRSAS VSKLCFSSLS HTQTPQMSPL WRGMSLPADI ITHS
101: KNPKHEAAIK LQKVYKSFRT RRKLADCAVL VEQSWWKLLD FAELKRSSIS FFDIEKHETA ISRWSRARTR AAKVGKGLSK NGKAQKLALQ HWLEAIDPRH
201: RYGHNLHFYY NKWLHCQSRE PFFYWLDIGE GKEVNLVEKC PRLKLQQQCI KYLGPMERKA YEVVVEEGKF FYKTSGEMLH SSMEESDSKW IFVLSTSKVL
301: YVGKKKKGTF QHSSFLAGGA TVAAGRLVVE SGVLKAVWPH SGHYQPTEDN FLDFLSFLRE NNVDITDVKM SPTDEDEFSL YKQRSTHMRN HSLEEDLESE
401: KTIILQDKAD PIEEEEEEET TPVTANIETP KKMDSTQVSE DYDSGDDEEE EEEIFNLEQE QSSPRGGEET RESEVVKIPE ESILKRINSK KESRSFQLGK
501: QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVHLSPRSAS VSKLCFSSLS HTQTPQMSPL WRGMSLPADI ITHS
001: MGVSFSCPFA EQDDVEAALD SVTVKSISFG DDDECKTPKR SVNFNDGTLE PTILKSMGSG KMVVEKSVSL KGMQLERMIS LNRSVKDNGF EIAKEFSVLD
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
101: PRNPKHEAAI KLQKVYKSFR TRRKLADCAV LVEQSWWKLL DFAELKRSSI SFFDIEKHET AISRWSRART RAAKVGKGLS KNGKAQKLAL QHWLEAIDPR
201: HRYGHNLHFY YNKWLHCQSR EPFFYWLDIG EGKEVNLVEK CPRLKLQQQC IKYLGPMERK AYEVVVEDGK FFYKHSGEIL QTSDMEDSES KWIFVLSTSK
301: VLYVGKKKKG TFQHSSFLAG GATVAAGRLV VENGVLKAVW PHSGHYQPTE ENFMDFLSFL RENDVDITDV KMSPTDEDEF SIYKQRSTHM RNHSLEEDLE
401: AEKTISFQDK VDPSGEEQTL MRNESISRKQ SDLETPEKME SFSTFGDEIQ SVGSKSTKVS EDYDSGDDEE EEEEMFELEQ ESMPSEQSSP RGEEKEEGET
501: KESEVVKITE ESILKRINSK KETKSFQLGK QLSCKWTTGA GPRIGCVRDY PSELQFQALE QVNLSPRSAS VSRLCFSSSS QTQTPQMSPL WRGMSLPTDI
601: TLTNS
Arabidopsis Description
IQM2Calmodulin-binding family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VF87]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.