Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13342 | Canola | cytosol | 95.03 | 37.72 |
| CDX67541 | Canola | cytosol | 94.48 | 37.5 |
| CDX76252 | Canola | cytosol | 87.29 | 34.65 |
| CDX95381 | Canola | cytosol | 87.29 | 34.65 |
| AT3G52870.1 | Thale cress | cytosol | 85.64 | 33.99 |
| CDY45027 | Canola | extracellular | 2.21 | 33.33 |
| Zm00001d004916_P001 | Maize | cytosol | 56.35 | 27.79 |
| GSMUA_Achr3P03060_001 | Banana | cytosol | 55.25 | 26.18 |
| Solyc10g085610.1.1 | Tomato | cytosol | 57.46 | 23.91 |
| EES09264 | Sorghum | cytosol | 58.01 | 23.08 |
| Solyc10g083360.1.1 | Tomato | cytosol | 59.12 | 22.96 |
| PGSC0003DMT400072375 | Potato | cytosol | 59.12 | 22.96 |
| Zm00001d052525_P001 | Maize | cytosol | 58.56 | 22.65 |
| PGSC0003DMT400022916 | Potato | cytosol | 64.64 | 22.5 |
| KRH30882 | Soybean | cytosol | 58.56 | 22.36 |
| VIT_08s0007g03630.t01 | Wine grape | cytosol | 57.46 | 22.22 |
| KRH32680 | Soybean | cytosol | 59.12 | 22.15 |
| KRG96176 | Soybean | plastid | 56.91 | 22.06 |
| TraesCS5A01G129600.1 | Wheat | cytosol | 55.8 | 21.91 |
| Solyc09g009770.2.1 | Tomato | nucleus | 63.54 | 21.9 |
| HORVU6Hr1G019510.4 | Barley | cytosol | 57.46 | 21.76 |
| TraesCS6D01G097300.1 | Wheat | cytosol | 58.01 | 21.69 |
| EES16640 | Sorghum | cytosol | 54.14 | 21.68 |
| TraesCS5B01G128200.1 | Wheat | cytosol | 57.46 | 21.67 |
| TraesCS5D01G137100.1 | Wheat | cytosol | 57.46 | 21.67 |
| TraesCS6A01G108900.1 | Wheat | cytosol | 58.01 | 21.65 |
| Os12t0149900-01 | Rice | cytosol | 56.91 | 21.59 |
| GSMUA_Achr6P13300_001 | Banana | cytosol | 58.56 | 21.41 |
| HORVU5Hr1G041930.15 | Barley | cytosol | 56.91 | 21.33 |
| TraesCS6B01G137500.1 | Wheat | cytosol | 56.91 | 21.33 |
| EES09263 | Sorghum | cytosol | 51.93 | 20.7 |
| Zm00001d035377_P001 | Maize | cytosol | 49.17 | 20.41 |
| TraesCS6D01G093400.1 | Wheat | cytosol | 53.59 | 20.21 |
| Os11t0151002-00 | Rice | cytosol | 52.49 | 20.04 |
| TraesCS6B01G133900.1 | Wheat | cytosol | 52.49 | 19.92 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 54.7 | 17.68 |
| CDX68935 | Canola | plastid | 43.09 | 16.63 |
| CDX77035 | Canola | plastid | 43.65 | 16.49 |
| CDY60813 | Canola | cytosol | 41.99 | 16.45 |
| CDY45026 | Canola | cytosol | 43.65 | 15.34 |
| CDY35312 | Canola | plastid | 44.2 | 15.3 |
| KRH67885 | Soybean | cytosol | 29.83 | 15.17 |
| CDX75320 | Canola | endoplasmic reticulum, extracellular | 29.83 | 14.92 |
| CDX88987 | Canola | nucleus | 44.2 | 14.49 |
| CDY00568 | Canola | nucleus | 44.75 | 14.46 |
| CDY37478 | Canola | nucleus | 43.65 | 14.23 |
| CDY28281 | Canola | cytosol, plastid | 43.65 | 14.18 |
| CDY23623 | Canola | nucleus | 43.65 | 13.76 |
| CDX97500 | Canola | nucleus | 43.65 | 13.72 |
| CDX75719 | Canola | cytosol | 23.2 | 8.05 |
| CDX80650 | Canola | extracellular | 2.76 | 5.75 |
| CDX82532 | Canola | cytosol | 10.5 | 3.78 |
| TraesCS6A01G104600.1 | Wheat | nucleus | 0.55 | 0.37 |
| CDY06038 | Canola | mitochondrion, nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY13341 | EnsemblPlantsGene:GSBRNA2T00071347001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000048 |
| InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF23 | PFscan:PS50096 | ProteinID:CDY13341 | ProteinID:CDY13341.1 |
| UniParc:UPI0004EE3EAF | UniProt:A0A078FJH3 | MapMan:35.1 | : | : | : |
Description
BnaC06g14160DBnaC06g14160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJH3]
Coordinates
chrLK032034:+:472461..474214
Molecular Weight (calculated)
20780.5 Da
IEP (calculated)
8.780
GRAVY (calculated)
-0.435
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVVAKFDFQ SPPFSHAAGE ILISPVDRRA ESFANFTEAL EGACPDSPSS LAAVKVQKVY RSYRTRRRLA DSVVVAEELW WQAMDYARLN HSTISFFDYS
101: RPETAVSRWN RVSLNASKVG KGLSIVDKAE KLAFQHWIEA IDPRHRYGHN LHVYYEEWCK ADAGQPFFYC KRKEMVLGDR G
101: RPETAVSRWN RVSLNASKVG KGLSIVDKAE KLAFQHWIEA IDPRHRYGHN LHVYYEEWCK ADAGQPFFYC KRKEMVLGDR G
001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI
Arabidopsis Description
IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.