Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Solyc10g083360.1.1 | Tomato | cytosol | 94.42 | 94.42 |
KRG96176 | Soybean | plastid | 61.8 | 61.67 |
KRH30882 | Soybean | cytosol | 62.23 | 61.18 |
Bra028537.1-P | Field mustard | cytosol | 59.23 | 60.53 |
CDX67541 | Canola | cytosol | 59.23 | 60.53 |
CDY13342 | Canola | cytosol | 59.23 | 60.53 |
KRH32680 | Soybean | cytosol | 62.66 | 60.46 |
PGSC0003DMT400022916 | Potato | cytosol | 66.52 | 59.62 |
AT3G52870.1 | Thale cress | cytosol | 58.15 | 59.43 |
Bra019642.1-P | Field mustard | cytosol | 57.94 | 59.21 |
CDY13341 | Canola | cytosol | 22.96 | 59.12 |
CDX95381 | Canola | cytosol | 57.73 | 58.99 |
CDX76252 | Canola | cytosol | 57.51 | 58.77 |
VIT_08s0007g03630.t01 | Wine grape | cytosol | 58.8 | 58.55 |
GSMUA_Achr3P03060_001 | Banana | cytosol | 46.35 | 56.54 |
EES09264 | Sorghum | cytosol | 54.94 | 56.26 |
TraesCS5A01G129600.1 | Wheat | cytosol | 53.86 | 54.45 |
Zm00001d052525_P001 | Maize | cytosol | 54.51 | 54.27 |
EES16640 | Sorghum | cytosol | 52.36 | 53.98 |
HORVU6Hr1G019510.4 | Barley | cytosol | 55.36 | 53.97 |
Os12t0149900-01 | Rice | cytosol | 54.72 | 53.46 |
TraesCS5D01G137100.1 | Wheat | cytosol | 54.94 | 53.33 |
TraesCS6B01G137500.1 | Wheat | cytosol | 55.15 | 53.21 |
TraesCS5B01G128200.1 | Wheat | cytosol | 54.72 | 53.12 |
TraesCS6D01G097300.1 | Wheat | cytosol | 55.15 | 53.1 |
HORVU5Hr1G041930.15 | Barley | cytosol | 54.94 | 53.0 |
TraesCS6A01G108900.1 | Wheat | cytosol | 55.15 | 52.99 |
GSMUA_Achr6P13300_001 | Banana | cytosol | 56.22 | 52.93 |
Zm00001d035377_P001 | Maize | cytosol | 49.36 | 52.75 |
Zm00001d004916_P001 | Maize | cytosol | 41.2 | 52.32 |
TraesCS6D01G093400.1 | Wheat | cytosol | 53.43 | 51.88 |
Os11t0151002-00 | Rice | cytosol | 52.36 | 51.48 |
EES09263 | Sorghum | cytosol | 50.0 | 51.32 |
TraesCS6B01G133900.1 | Wheat | cytosol | 51.93 | 50.73 |
KRH67885 | Soybean | cytosol | 37.34 | 48.88 |
GSMUA_Achr10P... | Banana | endoplasmic reticulum, plastid | 54.94 | 45.71 |
TraesCS6A01G104600.1 | Wheat | nucleus | 25.75 | 44.12 |
PGSC0003DMT400082749 | Potato | cytosol | 40.99 | 40.99 |
PGSC0003DMT400021177 | Potato | cytosol, mitochondrion, nucleus, plastid | 42.27 | 40.2 |
PGSC0003DMT400006372 | Potato | endoplasmic reticulum, extracellular, golgi | 24.89 | 37.91 |
PGSC0003DMT400080788 | Potato | nucleus | 41.2 | 35.23 |
PGSC0003DMT400000881 | Potato | cytosol | 38.41 | 33.33 |
PGSC0003DMT400021529 | Potato | cytosol | 40.99 | 29.84 |
PGSC0003DMT400060938 | Potato | nucleus, plastid | 38.84 | 25.82 |
Protein Annotations
EnsemblPlants:PGSC0003DMT400072375 | EnsemblPlantsGene:PGSC0003DMG400028165 | EntrezGene:102601309 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
InterPro:IPR000048 | InterPro:IQ_motif_EF-hand-BS | PANTHER:PTHR31250 | PANTHER:PTHR31250:SF10 | PFscan:PS50096 | PGSC:PGSC0003DMG400028165 |
RefSeq:XP_006339127.1 | SEG:seg | UniParc:UPI00029631CA | UniProt:M1CQ68 | MapMan:35.1 | : |
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028165]
Coordinates
chr10:-:55748152..55752783
Molecular Weight (calculated)
52383.8 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.613
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MEFETHAPSC FDLSSQSPMN SFLDTNFAND RECQWPDSTG DVIPADTPTK LHAKAAMTVQ KVYRSYRTRR MLADSALVAE ELWWQALDYA RLNHSTISFF
101: NVPQPETAVS RWNRITLNAS KVGKGLSRDG KAQKLAFQHW IEAIDPRHRY GHNLHMYYKE WCKTDAGQPF FFWLDLGDGK KVELKECPRS KLQKQSIKYL
201: GPQEREHYEY VVAEGKILHS LTGNHLDTTN GLPGAKWIFV MSTSKRLYAG EKKKGIFHHS SFLAGGATLA AGRLVVKDGI LKSISAYSGH YRPTDDSLDS
301: FLSFLKENGV NLEETEIKKP RDDDESYEEG NSSESRSASD LSTISESLQV DLQKEEEKDF SSKLVISPQA EKASNYKRTL SGGLESPRAE VPKTAILQRI
401: NSKKLSKSYQ LGHQLSLAWS TGAGPRIGCI NDYPVELREQ ALELTHLSPR PRSASSTPRP IGAMVM
101: NVPQPETAVS RWNRITLNAS KVGKGLSRDG KAQKLAFQHW IEAIDPRHRY GHNLHMYYKE WCKTDAGQPF FFWLDLGDGK KVELKECPRS KLQKQSIKYL
201: GPQEREHYEY VVAEGKILHS LTGNHLDTTN GLPGAKWIFV MSTSKRLYAG EKKKGIFHHS SFLAGGATLA AGRLVVKDGI LKSISAYSGH YRPTDDSLDS
301: FLSFLKENGV NLEETEIKKP RDDDESYEEG NSSESRSASD LSTISESLQV DLQKEEEKDF SSKLVISPQA EKASNYKRTL SGGLESPRAE VPKTAILQRI
401: NSKKLSKSYQ LGHQLSLAWS TGAGPRIGCI NDYPVELREQ ALELTHLSPR PRSASSTPRP IGAMVM
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.