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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g083360.1.1 Tomato cytosol 94.42 94.42
KRG96176 Soybean plastid 61.8 61.67
KRH30882 Soybean cytosol 62.23 61.18
Bra028537.1-P Field mustard cytosol 59.23 60.53
CDX67541 Canola cytosol 59.23 60.53
CDY13342 Canola cytosol 59.23 60.53
KRH32680 Soybean cytosol 62.66 60.46
PGSC0003DMT400022916 Potato cytosol 66.52 59.62
AT3G52870.1 Thale cress cytosol 58.15 59.43
Bra019642.1-P Field mustard cytosol 57.94 59.21
CDY13341 Canola cytosol 22.96 59.12
CDX95381 Canola cytosol 57.73 58.99
CDX76252 Canola cytosol 57.51 58.77
VIT_08s0007g03630.t01 Wine grape cytosol 58.8 58.55
GSMUA_Achr3P03060_001 Banana cytosol 46.35 56.54
EES09264 Sorghum cytosol 54.94 56.26
TraesCS5A01G129600.1 Wheat cytosol 53.86 54.45
Zm00001d052525_P001 Maize cytosol 54.51 54.27
EES16640 Sorghum cytosol 52.36 53.98
HORVU6Hr1G019510.4 Barley cytosol 55.36 53.97
Os12t0149900-01 Rice cytosol 54.72 53.46
TraesCS5D01G137100.1 Wheat cytosol 54.94 53.33
TraesCS6B01G137500.1 Wheat cytosol 55.15 53.21
TraesCS5B01G128200.1 Wheat cytosol 54.72 53.12
TraesCS6D01G097300.1 Wheat cytosol 55.15 53.1
HORVU5Hr1G041930.15 Barley cytosol 54.94 53.0
TraesCS6A01G108900.1 Wheat cytosol 55.15 52.99
GSMUA_Achr6P13300_001 Banana cytosol 56.22 52.93
Zm00001d035377_P001 Maize cytosol 49.36 52.75
Zm00001d004916_P001 Maize cytosol 41.2 52.32
TraesCS6D01G093400.1 Wheat cytosol 53.43 51.88
Os11t0151002-00 Rice cytosol 52.36 51.48
EES09263 Sorghum cytosol 50.0 51.32
TraesCS6B01G133900.1 Wheat cytosol 51.93 50.73
KRH67885 Soybean cytosol 37.34 48.88
GSMUA_Achr10P... Banana endoplasmic reticulum, plastid 54.94 45.71
TraesCS6A01G104600.1 Wheat nucleus 25.75 44.12
PGSC0003DMT400082749 Potato cytosol 40.99 40.99
PGSC0003DMT400021177 Potato cytosol, mitochondrion, nucleus, plastid 42.27 40.2
PGSC0003DMT400006372 Potato endoplasmic reticulum, extracellular, golgi 24.89 37.91
PGSC0003DMT400080788 Potato nucleus 41.2 35.23
PGSC0003DMT400000881 Potato cytosol 38.41 33.33
PGSC0003DMT400021529 Potato cytosol 40.99 29.84
PGSC0003DMT400060938 Potato nucleus, plastid 38.84 25.82
Protein Annotations
EnsemblPlants:PGSC0003DMT400072375EnsemblPlantsGene:PGSC0003DMG400028165EntrezGene:102601309GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR000048InterPro:IQ_motif_EF-hand-BSPANTHER:PTHR31250PANTHER:PTHR31250:SF10PFscan:PS50096PGSC:PGSC0003DMG400028165
RefSeq:XP_006339127.1SEG:segUniParc:UPI00029631CAUniProt:M1CQ68MapMan:35.1:
Description
Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028165]
Coordinates
chr10:-:55748152..55752783
Molecular Weight (calculated)
52383.8 Da
IEP (calculated)
8.428
GRAVY (calculated)
-0.613
Length
466 amino acids
Sequence
(BLAST)
001: MEFETHAPSC FDLSSQSPMN SFLDTNFAND RECQWPDSTG DVIPADTPTK LHAKAAMTVQ KVYRSYRTRR MLADSALVAE ELWWQALDYA RLNHSTISFF
101: NVPQPETAVS RWNRITLNAS KVGKGLSRDG KAQKLAFQHW IEAIDPRHRY GHNLHMYYKE WCKTDAGQPF FFWLDLGDGK KVELKECPRS KLQKQSIKYL
201: GPQEREHYEY VVAEGKILHS LTGNHLDTTN GLPGAKWIFV MSTSKRLYAG EKKKGIFHHS SFLAGGATLA AGRLVVKDGI LKSISAYSGH YRPTDDSLDS
301: FLSFLKENGV NLEETEIKKP RDDDESYEEG NSSESRSASD LSTISESLQV DLQKEEEKDF SSKLVISPQA EKASNYKRTL SGGLESPRAE VPKTAILQRI
401: NSKKLSKSYQ LGHQLSLAWS TGAGPRIGCI NDYPVELREQ ALELTHLSPR PRSASSTPRP IGAMVM
Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)
001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV
Arabidopsis Description
IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.