Factsheet for TraesCS5A01G129600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G137100.1	Wheat	cytosol	93.49	89.79
TraesCS5B01G128200.1	Wheat	cytosol	92.19	88.54
HORVU5Hr1G041930.15	Barley	cytosol	92.62	88.41
TraesCS6A01G108900.1	Wheat	cytosol	89.8	85.36
Os12t0149900-01	Rice	cytosol	77.87	75.26
EES16640	Sorghum	cytosol	73.32	74.78
EES09264	Sorghum	cytosol	73.75	74.73
TraesCS6A01G104600.1	Wheat	nucleus	43.82	74.26
Zm00001d004916_P001	Maize	cytosol	58.79	73.84
Zm00001d052525_P001	Maize	cytosol	72.45	71.37
GSMUA_Achr3P03060_001	Banana	cytosol	48.59	58.64
CDY13342	Canola	cytosol	56.4	57.02
CDX67541	Canola	cytosol	56.4	57.02
Bra028537.1-P	Field mustard	cytosol	56.18	56.8
AT3G52870.1	Thale cress	cytosol	55.31	55.92
CDX76252	Canola	cytosol	55.31	55.92
CDX95381	Canola	cytosol	55.31	55.92
CDY13341	Canola	cytosol	21.91	55.8
Bra019642.1-P	Field mustard	cytosol	55.1	55.7
Solyc10g085610.1.1	Tomato	cytosol	51.84	54.94
KRH30882	Soybean	cytosol	56.4	54.85
VIT_13s0074g00760.t01	Wine grape	nucleus	52.49	54.14
PGSC0003DMT400072375	Potato	cytosol	54.45	53.86
Solyc10g083360.1.1	Tomato	cytosol	54.23	53.65
KRG96176	Soybean	plastid	54.01	53.32
KRH32680	Soybean	cytosol	55.53	53.0
GSMUA_Achr6P13300_001	Banana	cytosol	56.4	52.53
VIT_08s0007g03630.t01	Wine grape	cytosol	51.41	50.64
PGSC0003DMT400022916	Potato	cytosol	53.58	47.5
Solyc09g009770.2.1	Tomato	nucleus	53.15	46.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	55.31	45.54
KRH67885	Soybean	cytosol	34.71	44.94
TraesCS5A01G375700.1	Wheat	cytosol	45.77	39.51
TraesCS1A01G125400.1	Wheat	nucleus	41.21	36.75
TraesCS2A01G154900.1	Wheat	cytosol	44.69	36.52
TraesCS3A01G206400.1	Wheat	plastid	40.78	33.81
TraesCS4A01G021000.1	Wheat	nucleus	44.69	33.77

Protein Annotations

EnsemblPlants:TraesCS5A01G129600.1	EnsemblPlantsGene:TraesCS5A01G129600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	SEG:seg	MapMan:35.1

Description

No Description!

Coordinates

chr5A:+:290925028..290929812

Molecular Weight (calculated)

51279.2 Da

IEP (calculated)

7.390

GRAVY (calculated)

-0.595

Length

461 amino acids

Sequence
(BLAST)

001: MEVETVMPPP AAGLDRVDSA AREPTHTESS LPSPAAGGGA NGAATKVQKV YRSYRTRHKL ADSAVVVEEL WWEALDFARL NHSTVSFYDD PEPETAASRW
101: NRVSLNASKV GQGLSKDAKA LKLAFQHWIE AIDPRHRYGH NLHFYYDAWC QTQAGQPFFY WLDIGEGKDI ELPECSRALL KKQCIRYLGP QEREYYEYII
201: KEGKSVHKIS GEPLDTSQGS KGTKWIFVMS TAKKLYAGQK ERGVFQHSSF LAGGATIAAG RFTAENGVIK SIWAYSGHYK PSAENLTNFM SFLEENGVDL
301: KEVEVRSSTK EDYYEDPVPN IKENPAAAAM MASNTPQLKL PSNMVPEDKA SGPSPQTEAD EDNNVRVEQT RSAYQRTLSG GLQSHLDAVV SQDAILERVN
401: SKSRSKSYQL GHRLSLKWST GNGPRIGCVK DYPIELRMQA LEMVQLSPRA STPPASWRVP S

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.