Factsheet for TraesCS6A01G104600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G133900.1	Wheat	cytosol	93.75	53.46
TraesCS6D01G093400.1	Wheat	cytosol	93.01	52.71
TraesCS5A01G129600.1	Wheat	cytosol	74.26	43.82
TraesCS6A01G108900.1	Wheat	cytosol	77.57	43.51
Os12t0149900-01	Rice	cytosol	71.32	40.67
EES16640	Sorghum	cytosol	66.91	40.27
EES09264	Sorghum	cytosol	67.28	40.22
Zm00001d052525_P001	Maize	cytosol	65.07	37.82
Zm00001d004916_P001	Maize	cytosol	41.18	30.52
AT3G52870.1	Thale cress	cytosol	46.32	27.63
CDX67541	Canola	cytosol	45.96	27.41
CDY13342	Canola	cytosol	45.96	27.41
KRG96176	Soybean	plastid	47.06	27.41
KRH30882	Soybean	cytosol	47.43	27.22
Bra028537.1-P	Field mustard	cytosol	45.59	27.19
Bra019642.1-P	Field mustard	cytosol	45.22	26.97
CDX76252	Canola	cytosol	45.22	26.97
CDX95381	Canola	cytosol	45.22	26.97
KRH32680	Soybean	cytosol	47.79	26.92
VIT_13s0074g00760.t01	Wine grape	nucleus	42.65	25.95
GSMUA_Achr3P03060_001	Banana	cytosol	36.4	25.92
PGSC0003DMT400072375	Potato	cytosol	44.12	25.75
KRH67885	Soybean	cytosol	33.46	25.56
Solyc10g083360.1.1	Tomato	cytosol	43.38	25.32
VIT_08s0007g03630.t01	Wine grape	cytosol	41.54	24.15
GSMUA_Achr6P13300_001	Banana	cytosol	43.75	24.04
Solyc10g085610.1.1	Tomato	cytosol	37.87	23.68
PGSC0003DMT400022916	Potato	cytosol	43.38	22.69
Solyc09g009770.2.1	Tomato	nucleus	43.01	22.29
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	43.75	21.25
TraesCS5A01G375700.1	Wheat	cytosol	37.5	19.1
TraesCS2A01G154900.1	Wheat	cytosol	34.93	16.84
TraesCS4A01G021000.1	Wheat	nucleus	36.4	16.23
TraesCS3A01G206400.1	Wheat	plastid	30.51	14.93
TraesCS1A01G125400.1	Wheat	nucleus	27.57	14.51
CDY13341	Canola	cytosol	0.37	0.55

Protein Annotations

EnsemblPlants:TraesCS6A01G104600.1

EnsemblPlantsGene:TraesCS6A01G104600

PANTHER:PTHR31250

PANTHER:PTHR31250:SF10

MapMan:35.1

Description

No Description!

Coordinates

chr6A:+:73555985..73557212

Molecular Weight (calculated)

29223.4 Da

IEP (calculated)

8.967

GRAVY (calculated)

-0.483

Length

272 amino acids

Sequence
(BLAST)

001: MSGEPLDTSQ GPKGTKWIFV MSTAKKLYAG KKERGVFQHS SFLAGGATIA AGRFIAENGV IKSIWAYSGH YKPSAENLSN FLSFLEENGV DLKEVEVCSF
101: TKEDYYEDPV PNTKQNPAAA IISSNPSQLI LPSNKASGAS SQTEADEGNN IRAEQARATY QRTLSGGLQS PRDAGVSQEA ILERVNSKSK SKSYQLGHRL
201: SLKWSTGNGP RIGCVKDYPM ELRIQALEMV QQSTTLTKGI DSSGHMEGTG MPLAHLANVA PRASADLPAP AK

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.