Factsheet for TraesCS6D01G093400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G133900.1	Wheat	cytosol	93.12	93.71
TraesCS6A01G104600.1	Wheat	nucleus	52.71	93.01
TraesCS5D01G137100.1	Wheat	cytosol	79.17	79.17
TraesCS6D01G097300.1	Wheat	cytosol	77.92	77.27
EES09264	Sorghum	cytosol	68.96	72.75
Os12t0149900-01	Rice	cytosol	72.08	72.54
EES16640	Sorghum	cytosol	68.12	72.35
Zm00001d004916_P001	Maize	cytosol	53.96	70.57
Zm00001d052525_P001	Maize	cytosol	67.71	69.44
CDX67541	Canola	cytosol	53.75	56.58
CDY13342	Canola	cytosol	53.75	56.58
Bra028537.1-P	Field mustard	cytosol	53.54	56.36
AT3G52870.1	Thale cress	cytosol	52.92	55.7
KRH30882	Soybean	cytosol	54.58	55.27
GSMUA_Achr3P03060_001	Banana	cytosol	43.75	54.97
VIT_13s0074g00760.t01	Wine grape	nucleus	50.42	54.14
CDX95381	Canola	cytosol	51.25	53.95
KRH32680	Soybean	cytosol	54.17	53.83
KRG96176	Soybean	plastid	52.29	53.75
Bra019642.1-P	Field mustard	cytosol	51.04	53.73
CDX76252	Canola	cytosol	51.04	53.73
CDY13341	Canola	cytosol	20.21	53.59
PGSC0003DMT400072375	Potato	cytosol	51.88	53.43
Solyc10g085610.1.1	Tomato	cytosol	48.33	53.33
Solyc10g083360.1.1	Tomato	cytosol	51.04	52.58
VIT_08s0007g03630.t01	Wine grape	cytosol	49.17	50.43
GSMUA_Achr6P13300_001	Banana	cytosol	51.67	50.1
PGSC0003DMT400022916	Potato	cytosol	51.04	47.12
Solyc09g009770.2.1	Tomato	nucleus	50.83	46.48
KRH67885	Soybean	cytosol	32.5	43.82
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	50.42	43.21
TraesCS2D01G160200.1	Wheat	cytosol	41.25	34.68
TraesCS5D01G385200.2	Wheat	cytosol	38.54	33.21
TraesCS3D01G209200.2	Wheat	plastid	38.12	33.15
TraesCS1D01G128400.2	Wheat	nucleus	38.33	33.03
TraesCS4D01G281600.1	Wheat	nucleus	41.67	32.63

Protein Annotations

EnsemblPlants:TraesCS6D01G093400.1	EnsemblPlantsGene:TraesCS6D01G093400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PFscan:PS50096	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:+:58234191..58240382

Molecular Weight (calculated)

53065.7 Da

IEP (calculated)

8.065

GRAVY (calculated)

-0.451

Length

480 amino acids

Sequence
(BLAST)

001: MEVETAMPPP ATDLEHMDSA VLELAHTKLS LLSGSDANGA ATKVQKVYRS YRTRRNLADS AVVVEELWWQ ALDFARLNHN TVSFYDGPEP ETAASRWRRV
101: SLNASKVGQG LSRDAKALKL AFQHWIEAID PRHRRGHNLY FYYDVWCQTQ AGQPFFYWLD IGEGKDVDLP ECPRALLKKQ CIRYLGPQER EYYEYIITEG
201: KITHKMSGEP LDTSQGPKGT KWIFVMSTAK KLYAGKKERG VFQHSSFLAG GATIAAGRFI AENGVIKSIW AYSGHYKPSA ENLSNFLSFL EENGVDLKEV
301: EVCSFTKEDC YEDPVHNTKQ NPTAASISSN PSQLILPSNK ASGSSSQTEA DEGNNVRAEQ ARATYQRTLS GGLQSPRDVS VSQEAILERV NSMSKAKSYQ
401: LGHRLSLKWS TGNGPRIGCV KDYPMELRIQ ALEMVQQSTT LTKGIDSSGL VGGTGMPLAH LANVAACASS EILAPAKLRT

Best Arabidopsis Sequence Match ( AT2G26190.2 )
(BLAST)

001: MGLSLSLLLS AWKEVVTTQF FSFKNPVESF LETRSFSLKL KEGGLTSRTN SFKSENPQEK SPKTGMERSL SFNSWEIVTE VETEPMNKED EEIVEPTKPA
101: RNSLNGRNCE RIQITKPTIT PPTPFVFFSP RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWKT LDAAALNLSS VAFFEEEKHE TAVSKWARAR
201: TRAAKVGKGL SKDEKAQKLA LQHWLEAIDP RHRYGHNLHF YYDVWSASMS AQPFFYWLDI GDGKDVNLEH HPRSVLQKQC IKYLGPLERE AYEVIVEDGK
301: LMNKQSMTLI NSTEDSKSIF VLSTTRTLYV GQKKKGRFQH SSFLSGGATT AAGRLVAREG ILEAIWPYSG HYLPTEDNFN EFISFLEENN VDMTNVKVRN
401: IIFGCIHAKY EKWYVLTYLI

Arabidopsis Description

IQM4IQ domain-containing protein IQM4 [Source:UniProtKB/Swiss-Prot;Acc:O64851]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.