Factsheet for PGSC0003DMT400022916

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g009770.2.1	Tomato	nucleus	94.62	93.71
PGSC0003DMT400072375	Potato	cytosol	59.62	66.52
CDY13341	Canola	cytosol	22.5	64.64
Bra028537.1-P	Field mustard	cytosol	53.08	60.53
CDX67541	Canola	cytosol	53.08	60.53
CDY13342	Canola	cytosol	52.88	60.31
KRG96176	Soybean	plastid	54.04	60.17
AT3G52870.1	Thale cress	cytosol	52.69	60.09
CDX95381	Canola	cytosol	52.5	59.87
KRH30882	Soybean	cytosol	54.42	59.7
Bra019642.1-P	Field mustard	cytosol	52.31	59.65
CDX76252	Canola	cytosol	52.31	59.65
KRH32680	Soybean	cytosol	54.81	59.01
EES09264	Sorghum	cytosol	49.81	56.92
VIT_08s0007g03630.t01	Wine grape	cytosol	51.15	56.84
GSMUA_Achr3P03060_001	Banana	cytosol	41.35	56.28
HORVU6Hr1G019510.4	Barley	cytosol	50.0	54.39
EES16640	Sorghum	cytosol	47.12	54.2
Os12t0149900-01	Rice	cytosol	49.62	54.09
Zm00001d052525_P001	Maize	cytosol	48.65	54.06
TraesCS6B01G137500.1	Wheat	cytosol	50.19	54.04
TraesCS5D01G137100.1	Wheat	cytosol	49.81	53.96
TraesCS5B01G128200.1	Wheat	cytosol	49.62	53.75
TraesCS6A01G108900.1	Wheat	cytosol	50.0	53.61
TraesCS5A01G129600.1	Wheat	cytosol	47.5	53.58
TraesCS6D01G097300.1	Wheat	cytosol	49.81	53.51
HORVU5Hr1G041930.15	Barley	cytosol	49.42	53.21
Zm00001d035377_P001	Maize	cytosol	44.42	52.98
EES09263	Sorghum	cytosol	45.96	52.64
Zm00001d004916_P001	Maize	cytosol	37.12	52.59
GSMUA_Achr6P13300_001	Banana	cytosol	49.42	51.92
Os11t0151002-00	Rice	cytosol	47.12	51.69
TraesCS6D01G093400.1	Wheat	cytosol	47.12	51.04
TraesCS6B01G133900.1	Wheat	cytosol	46.15	50.31
KRH67885	Soybean	cytosol	32.31	47.19
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plastid	49.42	45.89
TraesCS6A01G104600.1	Wheat	nucleus	22.69	43.38
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	38.27	40.61
PGSC0003DMT400082749	Potato	cytosol	36.15	40.34
PGSC0003DMT400006372	Potato	endoplasmic reticulum, extracellular, golgi	21.73	36.93
PGSC0003DMT400080788	Potato	nucleus	35.96	34.31
PGSC0003DMT400000881	Potato	cytosol	33.85	32.77
PGSC0003DMT400021529	Potato	cytosol	38.46	31.25
PGSC0003DMT400060938	Potato	nucleus, plastid	34.23	25.39

Protein Annotations

EnsemblPlants:PGSC0003DMT400022916	EnsemblPlantsGene:PGSC0003DMG400008882	EntrezGene:102605016	PANTHER:PTHR31250	PANTHER:PTHR31250:SF10	PGSC:PGSC0003DMG400008882
RefSeq:XP_006341115.1	SEG:seg	UniParc:UPI0002969A65	UniProt:M1AHG0	MapMan:35.1	:

Description

Calmodulin binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400008882]

Coordinates

chr9:+:2800029..2804470

Molecular Weight (calculated)

57734.1 Da

IEP (calculated)

8.380

GRAVY (calculated)

-0.531

Length

520 amino acids

Sequence
(BLAST)

001: MEVETTGVPN FDLTNSSSQV SSIPPYRKLI DMSACKLTEL RIPDFRSSDD MPELEGFGSP VSAGVECENG MVSFPGSPSV SENGGRECDF SEFVEKTPSN
101: AAKRLQKVYR SYRTRRMLAD SAVVAEELWW QAIDYARLNH STISFFDYSK PETAVSRWNR VSLNASKVGK GLSKDAEAQI LAFQHWIEAI DPRHRYGHNM
201: HIYYEEWCKT DAGQPFFFWL DLGDGRKVDL KECPRAKLQK QCIKYLGPQE RQHYEYIIAG GQILHKLTGS FLDTTKGPDG AKWIFVMSTS KRLYAGEKKK
301: GMFHHSSFLA GGAALAAGRL VVQDGTVKSI SPYSGHYRPS DDSLETFLSI LKEHGVNVDE VEIKKANEDY DTSGDVNVNV KSVDKRPPKL STPPQAVKEE
401: KKESIGSPQA ATSCYQRTLS GGLHSPRTEV PKTAILERIN SKKSSRSYQL GHQLSRVWST GAGPRIGCIA DYPAELRWQA LELTNVSPKP SPSSTPRPLD
501: AVCSPTCSSP VFNNVLVKSS

Best Arabidopsis Sequence Match ( AT3G52870.1 )
(BLAST)

001: MQVVSSFDFQ SSPFSHGAGE ILISPVDHRE LSSHGDALEG ACDDSTRLAA VKVQKVYRSY RTRRRLADSV VVAEELWWQA MDYARLNHST ISFFDYSRPE
101: TAVSRWNRVS LNASKVGKGL SIVDKAQKLA FQHWIEAIDP RHRYGHNLHK YYEEWCKADA GQPFFYWLDV GGGIDLDLNE CPRSKLKQQC IRYLGPQERE
201: EYEYVIIEGK IVHKLTGKFL HTMHGSEGTK WIFVMSTFKK LYAGLKKKGR FHHSSFLAGG ATLAAGRVIV DNGVLKTISA YSGHYRPSDD SLDTFLGFLR
301: ENAVNLDNVE VHKASEDSDS YDDYVKSNGG SEPEPLKKED TTFQAETETD ENGNGTVGTL EEAKRSSYQR TLSGGLGSPK ANVPQKSMLL RINSKKQSRS
401: LQLGHQLSLK WSTGVGPRIG CAADYPVQLR TQALEFVNLS PKYRSSRLSP TGKLDV

Arabidopsis Description

IQM3IQ domain-containing protein IQM3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.