CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45026	Canola	cytosol	90.66	98.06
CDX68935	Canola	plastid	76.12	90.41
CDX75320	Canola	endoplasmic reticulum, extracellular	58.53	90.06
AT4G33050.5	Thale cress	plastid	78.1	77.68
CDX77035	Canola	plastid	65.35	75.99
CDY35312	Canola	plastid	69.84	74.38
Zm00001d050807_P001	Maize	cytosol	15.98	62.24
PGSC0003DMT400021177	Potato	cytosol, mitochondrion, nucleus, plastid	54.4	61.84
VIT_04s0008g01070.t01	Wine grape	cytosol, extracellular, nucleus	57.27	59.07
CDY45027	Canola	extracellular	1.26	58.33
GSMUA_Achr4P09170_001	Banana	cytosol	50.27	57.61
GSMUA_Achr8P05470_001	Banana	plastid	51.17	57.11
KRH19209	Soybean	cytosol	27.65	56.83
GSMUA_Achr8P24930_001	Banana	cytosol	38.96	56.36
GSMUA_Achr8P26270_001	Banana	plastid	48.47	56.25
KRH12419	Soybean	cytosol, plastid	52.24	55.22
KRH37419	Soybean	cytosol, extracellular, nucleus, plastid	51.89	54.73
GSMUA_Achr3P25890_001	Banana	mitochondrion	50.81	54.63
KRH02687	Soybean	plastid	51.35	53.96
GSMUA_Achr4P08700_001	Banana	extracellular, nucleus, plastid, vacuole	51.53	53.54
Zm00001d036000_P001	Maize	cytosol	13.29	52.48
Zm00001d009755_P001	Maize	plastid	40.93	51.12
TraesCS3B01G238500.1	Wheat	cytosol, plastid	49.01	50.46
Zm00001d042156_P001	Maize	mitochondrion	17.06	50.0
CDY60813	Canola	cytosol	40.93	49.35
TraesCS3A01G206400.1	Wheat	plastid	48.83	48.92
TraesCS3D01G209200.2	Wheat	plastid	48.47	48.91
Os01t0570800-01	Rice	plastid	49.19	48.15
HORVU3Hr1G049640.1	Barley	plastid	47.58	48.09
Zm00001d044253_P001	Maize	plastid	47.22	46.8
EES03151	Sorghum	mitochondrion, plastid	48.11	46.53
Solyc08g062930.1.1	Tomato	cytosol	32.5	46.41
CDY13341	Canola	cytosol	14.18	43.65
CDY37478	Canola	nucleus	43.27	43.42
EES18807	Sorghum	plastid	44.52	43.13
Zm00001d011228_P001	Maize	plastid	42.01	42.55
CDY23623	Canola	nucleus	43.27	41.99
CDX97500	Canola	nucleus	43.27	41.84
CDX88987	Canola	nucleus	41.11	41.49
CDY00568	Canola	nucleus	41.29	41.07
CDX95381	Canola	cytosol	32.67	39.91
CDX76252	Canola	cytosol	32.5	39.69
CDY13342	Canola	cytosol	32.5	39.69
CDX67541	Canola	cytosol	32.5	39.69
CDY06038	Canola	mitochondrion, nucleus	4.85	37.5
CDX80650	Canola	extracellular	5.75	36.78
CDX75719	Canola	cytosol	32.5	34.67
CDX82532	Canola	cytosol	29.98	33.27
GSMUA_Achr3P32310_001	Banana	endoplasmic reticulum	49.91	30.85

Protein Annotations

EnsemblPlants:CDY28281	EnsemblPlantsGene:GSBRNA2T00040024001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000048
InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR31250	PANTHER:PTHR31250:SF1	PFAM:PF00612	ProteinID:CDY28281	ProteinID:CDY28281.1
SEG:seg	SMART:SM00015	UniParc:UPI0004EE2347	UniProt:A0A078GS00	MapMan:35.1	:

Description

BnaC03g66780DBnaC03g66780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS00]

Coordinates

chrLK032217:-:95709..99340

Molecular Weight (calculated)

63148.6 Da

IEP (calculated)

9.013

GRAVY (calculated)

-0.617

Length

557 amino acids

Sequence
(BLAST)

001: MGLEVGSLSL KIKDGGLTSR TNSFNRDNTT HQNSPKINRK PTMQRSLSFN SWEKPTITPP EPFVFFSPRP VTELDAAATT VQKVYKSYRT RRNLADCAVL
101: VEELWQKSLD AAAHKLSSNT EETKNDSGFK VLETKKSTHN TLNGRNCERI QIKKPTVTPP EPFVFFSPRP VTELDAAATT LQKVYKSYRT RRNLADCAVV
201: VEELWWKTLD AATLDLSSVS FFEEEKHEPA ASKWVRARTR AAKVGKGLSK DEKAQKLALQ HWLEAIDPRH RYGHNLHFYY DVWSESKSSQ PFFYWLDIGD
301: GKDVNLEKHP RSVLQKQCIS YLGPMEREAY EVIVEDGRLM YKQSMDLINS TDESKSIFVL STTRTLYVGK KKKGVFQHSS FLSGGATTAA GRLVARDGIL
401: EAIWPYSGHY LPTEENFKEF ISFLEEHNVV LTNVKRCAVN EEYSSSFKST TEEEDEPKEV SEEVELPSGQ EERARPVFDH AKRLSCKWSS GYGPRIGCVR
501: DYPVELQAQA LEQVNLSPRV SPAYSYGPIP SPRPSPRVRV SPRLAYMGIP SPRGVKC

Best Arabidopsis Sequence Match ( AT4G33050.3 )
(BLAST)

001: MGLEVGSLCF KLKDGGLTSR TNSFKRDDTN RHQNSPKSTM ERSLSFNSWE VPKETKTDSD FEVLETKKST PNTLNGRNCE RIQIKKPTVT PPEPFVFFSP
101: RPVTELDAAA TTLQKVYKSY RTRRNLADCA VVVEELWWRT LEGAALDLSS VSFFGEEKHE TAVSKWARAR KRAAKVGKGL SKDEKAQKLA LQHWLEAIDP
201: RHRYGHNLHF YYDVWSASKS TQPFFYWLDI GDGKDVNLEK HPRSVLQKQC IRYLGPMERE AYEVIVEDGR LMYKQGMTLI NSTEEAKSIF VLSTTRNLYV
301: GIKKKGLFQH SSFLSGGATT AAGRLVARDG ILEAIWPYSG HYLPTEDNFK EFISFLEEHN VDLTNVKRCS VNEEYSSFKS TADEEEERKE VSEEVEIPSE
401: KEERARPVFD PVKRLSCKWT SGYGPRIGCV RDYPMELQAQ ALEQVSLSPR VSPANSYGPI PSPRPSPKVR VSPRLAYMGI PSPRAVKC

Arabidopsis Description

EDA39calmodulin-binding family protein [Source:TAIR;Acc:AT4G33050]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.