Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010749 | Potato | extracellular | 94.57 | 94.84 |
| Solyc05g006670.1.1 | Tomato | extracellular | 49.14 | 27.04 |
| Solyc11g056680.1.1 | Tomato | extracellular | 26.86 | 25.82 |
| Solyc10g052880.1.1 | Tomato | extracellular | 32.86 | 24.06 |
| Solyc07g065090.1.1 | Tomato | extracellular | 22.29 | 23.85 |
| Solyc09g014480.1.1 | Tomato | extracellular | 20.0 | 20.9 |
| Solyc09g014590.2.1 | Tomato | extracellular | 17.14 | 19.23 |
| Solyc04g008830.1.1 | Tomato | nucleus | 32.29 | 19.06 |
| Solyc01g086920.2.1 | Tomato | nucleus | 7.43 | 15.85 |
| KRH56365 | Soybean | cytosol | 0.57 | 1.21 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001611 |
| InterPro:IPR032675 | UniProt:K4ATU7 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp |
| PFAM:PF00560 | PFAM:PF08263 | PFAM:PF13855 | PANTHER:PTHR44401 | PANTHER:PTHR44401:SF1 | SMART:SM00369 |
| SUPFAM:SSF52058 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc01g011050.2 | EnsemblPlants:Solyc01g011050.2.1 | UniParc:UPI0002761EE2 | SEG:seg |
Description
No Description!
Coordinates
chr1:+:7014098..7016194
Molecular Weight (calculated)
37960.8 Da
IEP (calculated)
6.498
GRAVY (calculated)
0.054
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MASHQFICFL AMISLMIINI SANNACHPDD LKGLNDFKAG IHSDTSGRLS KWIGQDCCNW PGISCNSTTY RVVQIYLPGH YVSGDDESPN FVSSTMSGSI
101: SPSISLLTSL QVIDLNKLVG LTGQIPESIG VLKDLKELNL QTNQISSTIP ESVFTLTSLT TLNLENNHLT GEISENICNL QALQKLFLSN NSFTGKIPLS
201: ITKLHSISTI HLEKNQLVGE IQLPLTPSQW PSIKTLSLDN NALTGVIPDS IGYLTTLSSL SISNNQLTGS IPSSLGNIKQ LQMLKVNNNN LSVETLPTTM
301: CGLTELSVLY VSQNKIHGPL PGCLSSFKYL LDVDVPFKRT ATLPMGVQKQ
101: SPSISLLTSL QVIDLNKLVG LTGQIPESIG VLKDLKELNL QTNQISSTIP ESVFTLTSLT TLNLENNHLT GEISENICNL QALQKLFLSN NSFTGKIPLS
201: ITKLHSISTI HLEKNQLVGE IQLPLTPSQW PSIKTLSLDN NALTGVIPDS IGYLTTLSSL SISNNQLTGS IPSSLGNIKQ LQMLKVNNNN LSVETLPTTM
301: CGLTELSVLY VSQNKIHGPL PGCLSSFKYL LDVDVPFKRT ATLPMGVQKQ
001: MDTKKSLVIL LTNVVVFLLL STTVHSCLPS DRAALLEFRA KLNEPYIGVF NTWKGLDCCK GWYGVSCDPN TRRVAGITLR GESEDPLFQK AKRSGLMTGS
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
101: ISPSICKLTR LSGIIIADWK GISGVIPSCI ENLPFLRHLD LVGNKFSGVI PANIGKLLRL KVLNLADNHL YGVIPPSITR LVSLSHLDLR NNNISGVIPR
201: DIGRLKMVSR VLLSGNKISG QIPDSLTRIY RLADLELSMN RLTGPIPASF GKMSVLATLN LDGNLISGMI PGSLLASSIS NLNLSGNLIT GSIPNTFGPR
301: SYFTVLDLAN NRLQGPIPAS ITAASFIGHL DVSHNHLCGK IPMGSPFDHL DATSFAYNAC LCGKPLGNCK K
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:Q9LXU5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.