Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400065091 | Potato | extracellular | 93.93 | 93.93 |
VIT_10s0071g00860.t01 | Wine grape | extracellular, vacuole | 65.09 | 65.31 |
KRH36172 | Soybean | nucleus | 61.55 | 60.93 |
Bra026499.1-P | Field mustard | plastid | 50.42 | 60.4 |
KRG90583 | Soybean | extracellular | 56.16 | 60.22 |
CDY16850 | Canola | plastid | 50.25 | 60.2 |
CDY64876 | Canola | extracellular, vacuole | 57.17 | 58.15 |
CDX80361 | Canola | extracellular, vacuole | 57.0 | 57.58 |
CDX88024 | Canola | extracellular, vacuole | 56.66 | 57.24 |
Bra009680.1-P | Field mustard | extracellular, vacuole | 56.49 | 57.07 |
AT5G23400.1 | Thale cress | vacuole | 56.16 | 56.54 |
GSMUA_Achr1P06920_001 | Banana | plastid | 20.91 | 55.11 |
Os04t0677200-01 | Rice | cytosol, peroxisome | 37.94 | 51.49 |
TraesCS2D01G561100.1 | Wheat | extracellular | 37.77 | 50.56 |
TraesCS2B01G590900.1 | Wheat | extracellular | 37.1 | 49.22 |
TraesCS2A01G593600.1 | Wheat | endoplasmic reticulum, extracellular | 37.1 | 49.22 |
Zm00001d026617_P001 | Maize | extracellular | 40.81 | 46.9 |
KXG27431 | Sorghum | vacuole | 40.64 | 45.99 |
HORVU2Hr1G119550.1 | Barley | cytosol | 22.6 | 38.18 |
Solyc11g056680.1.1 | Tomato | extracellular | 22.77 | 37.09 |
Solyc10g052880.1.1 | Tomato | extracellular | 29.01 | 35.98 |
Solyc01g086920.2.1 | Tomato | nucleus | 9.95 | 35.98 |
Solyc07g065090.1.1 | Tomato | extracellular | 19.56 | 35.47 |
Solyc01g011050.2.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 19.06 | 32.29 |
Solyc05g006670.1.1 | Tomato | extracellular | 34.06 | 31.76 |
Solyc09g014480.1.1 | Tomato | extracellular | 17.88 | 31.64 |
Solyc09g014590.2.1 | Tomato | extracellular | 16.36 | 31.09 |
Protein Annotations
Gene3D:3.80.10.10 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
GO:GO:0005618 | GO:GO:0005623 | GO:GO:0009506 | GO:GO:0030312 | InterPro:IPR001611 | InterPro:IPR032675 |
UniProt:K4BP39 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PFAM:PF08263 |
PFAM:PF13516 | PFAM:PF13855 | PRINTS:PR00019 | PANTHER:PTHR43887 | SMART:SM00365 | SMART:SM00369 |
SUPFAM:SSF52058 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc04g008830.1 | EnsemblPlants:Solyc04g008830.1.1 | UniParc:UPI0002767325 | : |
Description
No Description!
Coordinates
chr4:-:2438053..2439834
Molecular Weight (calculated)
64343.2 Da
IEP (calculated)
8.690
GRAVY (calculated)
0.064
Length
593 amino acids
Sequence
(BLAST)
(BLAST)
001: MHFQMLVFKI LLISSFFHQM SLAQQPQICV ETDRLALVGF KDHIFKDTTG FLSSWTGKDC CGGGWEGVEC DVSTGRVNRL VLQTPSESDI SVYMKGTLSS
101: SLGDLVFLET LIVSGMKHIA GAIPESFSKL SRLKQLILDD NSLQGDIPSG LSHLESLQTL SLSGNHLTGQ IPSVLGNFKN LQQLSLADNM LTGVIPIGVK
201: NLAALQSLDL SHNLLSGVVP NFLGQLRNLT YIDLSSNELS GEVPVSLCGL IKLSFLSMDH NRITGRIPSQ IGKMKALTSL SLSFNKLTGQ IPESIAGLPN
301: LWNLSLSRNE LFDPLPIAFS KGVPSLLSID LSYNKFNLGV VPEWIRTREL SDVNLAGCKL RGMLPNFTRP DSLNSIDLSD NAFTGGISSF FARMLSLQKG
401: KISNNQLKSD VAVIKLPDGI SSLDLHSNQL FGSLSRMLSN KTSKFLEAID VSNNQLSGSI PEFVSGLNLK VLNIGSNKIS GQIPTSISNL DKLERFDISR
501: NQITGTIPVS LGSLVKLQWL DLSINRLSGK IPDSLLGIEA LKHANFRANR LCGEIPQGRP YNIFPAAAYA HNLCLCAKPL PPCKGTKQGK LGQ
101: SLGDLVFLET LIVSGMKHIA GAIPESFSKL SRLKQLILDD NSLQGDIPSG LSHLESLQTL SLSGNHLTGQ IPSVLGNFKN LQQLSLADNM LTGVIPIGVK
201: NLAALQSLDL SHNLLSGVVP NFLGQLRNLT YIDLSSNELS GEVPVSLCGL IKLSFLSMDH NRITGRIPSQ IGKMKALTSL SLSFNKLTGQ IPESIAGLPN
301: LWNLSLSRNE LFDPLPIAFS KGVPSLLSID LSYNKFNLGV VPEWIRTREL SDVNLAGCKL RGMLPNFTRP DSLNSIDLSD NAFTGGISSF FARMLSLQKG
401: KISNNQLKSD VAVIKLPDGI SSLDLHSNQL FGSLSRMLSN KTSKFLEAID VSNNQLSGSI PEFVSGLNLK VLNIGSNKIS GQIPTSISNL DKLERFDISR
501: NQITGTIPVS LGSLVKLQWL DLSINRLSGK IPDSLLGIEA LKHANFRANR LCGEIPQGRP YNIFPAAAYA HNLCLCAKPL PPCKGTKQGK LGQ
001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK
Arabidopsis Description
Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.