Factsheet for HORVU2Hr1G119550.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G590900.1	Wheat	extracellular	67.24	52.8
TraesCS2D01G561100.1	Wheat	extracellular	65.53	51.92
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	65.53	51.45
GSMUA_Achr1P06920_001	Banana	plastid	28.21	44.0
Os04t0677200-01	Rice	cytosol, peroxisome	50.71	40.73
KXG27431	Sorghum	vacuole	54.7	36.64
Zm00001d026617_P001	Maize	extracellular	53.56	36.43
Bra026499.1-P	Field mustard	plastid	37.32	26.46
CDY16850	Canola	plastid	37.32	26.46
KRG90583	Soybean	extracellular	39.32	24.95
Bra009680.1-P	Field mustard	extracellular, vacuole	40.17	24.02
CDX88024	Canola	extracellular, vacuole	40.17	24.02
CDX80361	Canola	extracellular, vacuole	39.89	23.85
CDY64876	Canola	extracellular, vacuole	39.03	23.5
AT5G23400.1	Thale cress	vacuole	39.03	23.26
VIT_10s0071g00860.t01	Wine grape	extracellular, vacuole	39.03	23.18
PGSC0003DMT400065091	Potato	extracellular	38.46	22.77
KRH36172	Soybean	nucleus	38.75	22.7
Solyc04g008830.1.1	Tomato	nucleus	38.18	22.6
HORVU7Hr1G050110.1	Barley	vacuole	24.79	22.42
HORVU7Hr1G050140.1	Barley	plastid	24.79	22.31
HORVU3Hr1G098610.1	Barley	extracellular	17.66	18.45
HORVU2Hr1G082160.1	Barley	cytosol	16.24	18.33
HORVU2Hr1G106620.1	Barley	extracellular	17.66	18.24
HORVU7Hr1G038570.1	Barley	mitochondrion	15.38	18.0
HORVU3Hr1G098730.2	Barley	endoplasmic reticulum, extracellular, mitochondrion	18.23	17.93
HORVU5Hr1G073500.1	Barley	extracellular, vacuole	17.66	17.71
HORVU2Hr1G082140.1	Barley	extracellular	15.95	17.02
HORVU1Hr1G002410.1	Barley	endoplasmic reticulum, vacuole	17.66	16.85
HORVU2Hr1G038990.1	Barley	plastid	16.24	15.62

Protein Annotations

EnsemblPlants:HORVU2Hr1G119550.1	EnsemblPlantsGene:HORVU2Hr1G119550	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45271
PFAM:PF13855	PRINTS:PR00019	SEG:seg	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000B464A2B
UniProt:A0A287JNJ5	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:745337005..745338062

Molecular Weight (calculated)

28509.6 Da

IEP (calculated)

10.386

GRAVY (calculated)

0.026

Length

351 amino acids

Sequence
(BLAST)

001: LDQGQCSVLC FSCSXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXT
101: GAVPSSYRNL SSLAYLDLSS NRLSGIVPEF VGRRFKSLAL LDLSNNSFSG EMPASLYALR HLADLSLSHN KIAGRIPPQV GSLRSLSSLS LNDNLFLGPI
201: PKSLFGLQKL WRLDLSKNKL TGALPDFAGG GSLKWLDVSK NAIGGQIPSS ISKLQGLERL DVSRNRVGGV IPATMAAMAS LEWLDLSSNA IVGRIPENFT
301: RMAGVRHASF RGNKLCGQIP QAAPFNRFPA AAYAHNLCLC GKPLPPCRKI S

Best Arabidopsis Sequence Match ( AT3G12610.1 )
(BLAST)

001: MRKLLASPFS SLLAVVFISV ISVVRCCSPK DQTALNAFKS SLSEPNLGIF NTWSENTDCC KEWYGISCDP DSGRVTDISL RGESEDAIFQ KAGRSGYMSG
101: SIDPAVCDLT ALTSLVLADW KGITGEIPPC ITSLASLRIL DLAGNKITGE IPAEIGKLSK LAVLNLAENQ MSGEIPASLT SLIELKHLEL TENGITGVIP
201: ADFGSLKMLS RVLLGRNELT GSIPESISGM ERLADLDLSK NHIEGPIPEW MGNMKVLSLL NLDCNSLTGP IPGSLLSNSG LDVANLSRNA LEGTIPDVFG
301: SKTYLVSLDL SHNSLSGRIP DSLSSAKFVG HLDISHNKLC GRIPTGFPFD HLEATSFSDN QCLCGGPLTT SC

Arabidopsis Description

DRT100DRT100 [Source:UniProtKB/TrEMBL;Acc:A0A178VMS3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.