Factsheet for GSMUA_Achr1P06920_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
cytosol 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0677200-01	Rice	cytosol, peroxisome	56.44	29.06
TraesCS2D01G561100.1	Wheat	extracellular	56.0	28.44
TraesCS2A01G593600.1	Wheat	endoplasmic reticulum, extracellular	56.44	28.41
HORVU2Hr1G119550.1	Barley	cytosol	44.0	28.21
TraesCS2B01G590900.1	Wheat	extracellular	55.56	27.96
GSMUA_Achr10P...	Banana	cytosol	33.78	27.64
GSMUA_Achr4P01520_001	Banana	cytosol	33.33	27.27
Zm00001d026617_P001	Maize	extracellular	57.33	25.0
KXG27431	Sorghum	vacuole	57.33	24.62
VIT_10s0071g00860.t01	Wine grape	extracellular, vacuole	62.22	23.69
Bra026499.1-P	Field mustard	plastid	52.0	23.64
CDY16850	Canola	plastid	51.56	23.43
KRG90583	Soybean	extracellular	56.0	22.78
KRH36172	Soybean	nucleus	59.56	22.37
PGSC0003DMT400065091	Potato	extracellular	57.33	21.75
GSMUA_Achr6P22250_001	Banana	extracellular	31.56	21.65
Solyc04g008830.1.1	Tomato	nucleus	55.11	20.91
GSMUA_AchrUn_...	Banana	cytosol	30.67	20.78
GSMUA_Achr3P03820_001	Banana	endoplasmic reticulum, extracellular	34.22	20.7
CDY64876	Canola	extracellular, vacuole	52.44	20.24
AT5G23400.1	Thale cress	vacuole	52.89	20.2
CDX80361	Canola	extracellular, vacuole	51.56	19.76
CDX88024	Canola	extracellular, vacuole	51.11	19.59
Bra009680.1-P	Field mustard	extracellular, vacuole	50.67	19.42
GSMUA_Achr9P12430_001	Banana	extracellular	24.89	18.54

Protein Annotations

EnsemblPlants:GSMUA_Achr1P06920_001	EnsemblPlants:GSMUA_Achr1T06920_001	EnsemblPlantsGene:GSMUA_Achr1G06920_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF00560	PFAM:PF13855	SEG:seg	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002956F53
UniProt:M0RXQ0	MapMan:35.1	:	:	:	:

Description

Putative LRR receptor-like serine/threonine-protein kinase FLS2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G06920_001]

Coordinates

chr1:-:5492627..5493927

Molecular Weight (calculated)

24229.6 Da

IEP (calculated)

10.125

GRAVY (calculated)

0.009

Length

225 amino acids

Sequence
(BLAST)

001: MLQGSIPSSL GRLTSLKTLS LSGNLLQGQL PPTLGSIKGL LQINMGRNLL TGPIPSAFSS LHSLESLDLS KNMLSGEIPS FVGKYQNLTF VDLSNNQFSG
101: EIPMSLCSLS NAMDISLSQN KLTGQIPHQI DGLKSLTSLS LGANLLSGSI PESLSRLQKL WYLNLLNGSV PNNLTRLVNI RHASFRANRL CGQIPQSRPF
201: NIFPTAAYAH NMCLCGQPLS PCKKP

Best Arabidopsis Sequence Match ( AT5G23400.1 )
(BLAST)

001: MQNLKWVLMN LLFVSALVRN FVLSSSQQVI CSSQDRATLL GFKSSIIEDT TGVLDSWVGK DCCNGDWEGV QCNPATGKVT GLVLQSAVNE PTLYMKGTLS
101: PSLGNLRSLE LLLITGNKFI TGSIPNSFSN LTSLRQLILD DNSLQGNVLS SLGHLPLLEI LSLAGNRFSG LVPASFGSLR RLTTMNLARN SFSGPIPVTF
201: KNLLKLENLD LSSNLLSGPI PDFIGQFQNL TNLYLSSNRF SGVLPVSVYS LRKLQTMSLE RNGLTGPLSD RFSYLKSLTS LQLSGNKFIG HIPASITGLQ
301: NLWSLNLSRN LFSDPLPVVG ARGFPSLLSI DLSYNNLNLG AIPSWIRDKQ LSDINLAGCK LRGTFPKLTR PTTLTSLDLS DNFLTGDVSA FLTSLTNVQK
401: VKLSKNQLRF DLSKLKLPEG VASIDLSSNL VTGSLSSLIN NKTSSFLEEI HLTNNQISGR IPDFGESLNL KVLNIGSNKI SGQIPSSISN LVELVRLDIS
501: RNHITGGIPQ AIGQLAQLKW LDLSINALTG RIPDSLLNIK TIKHASFRAN RLCGQIPQGR PFNIFPAAAY LHNLCLCGKP LPACRKTMK

Arabidopsis Description

Disease resistance protein-like [Source:UniProtKB/TrEMBL;Acc:Q9FHL8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.